allele_stats | Gets allele stats |
allele_stats_ | Gets allele stats |
asmap_prog | Runs mstmap for a linkage groups of map objects that satisfy... |
asmap_step | A wrapper around ASMap::mstmap with some error handling.... |
bind_map_list | Bind a list of mapdfs together |
bp_cross | A biparental cross object |
bp_map | A biparental map object |
check_parents_ | Checks informativeness of parents |
convert_rel | Convert absolute scores to relative |
convert_rel_ | Convert absolute scores to relative (standard-evaluation) |
convertScore | Converts a single marker, typically a row in a data.frame. |
geno2df | Convert R/qtl genotyping data into data.frame |
genoComp | Take a linkage group from a cross object, convert into long... |
genoPlot | Plot genotype data for a linkage group |
genoSeg | Compares segregation of markers based on agreement of two... |
get_lg_lengths | Get linkage group extents |
get_lg_names | Title |
get_lg_stats | Returns the maximum distance between markers for a linkage... |
get_map_coords | Get offsets for linkage groups |
ggholman | ONLY FOR BACKWARDS COMPATIBILITY - Produce a plot of a... |
ggholmans | Produce a plot of a trinomial distribution in a Holmans'... |
ggholmans.theme | A theme for trinomial plots |
isHet | Checks genotype scores for heterozygosity |
isHomo | Checks genotype scores for homozygosity |
join2maps | Join two map dfs |
longmaps | Take output from /codejoin2maps() and put into long form for... |
m4_cross | A multiparental cross object |
m8_cross | A multiparental cross object |
make_nptest_classes | Converts a character vector of genotype scores into two... |
map2df | Convert R/qtl map into a tidy data.frame |
revmap | Reverse particular linkage groups in a map from a cross... |
revmaplgs | Take output from /codejoin2maps() and a map object to be... |
revvec | Provide the 'mirror image' of a vector, especially of... |
trixy | Convert trinomial distribution into x y values Takes a... |
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