plotAverageModel: Plot for the model-averaged response values and bmd

Description Usage Arguments Value

View source: R/modelAveraging.R

Description

Plot for the model-averaged response values and bmd

Usage

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plotAverageModel(proastData, xans, yans, nans = 0, bmd, modelResults,
  bootstrapBmd = NULL, bootstrapModelResults = NULL,
  confidenceLevel = 0.9, naiveApproach = FALSE)

Arguments

proastData

list, data in proast format as returned by f.scan()

xans

integer, indicates the column in proastData$data containing x-values (dose)

yans

integer, indicates the column in proastData$data containing y-values (response)

nans

integer, indicates the column in proastData$data containing sample size; if irrelevant set to 0; default value is 0

bmd

numeric value, the estimated model-averaged BMD as returned by optimizeBmd()

modelResults

list, with results for fitted model for bmd; contains at least npar, loglik, model.ans, regr.par, CES and ces.ans; these are by default included in result from f.proast(); Eventually contains also fct1 and fct2 if factors are included for the model parameters

bootstrapBmd

numeric vector, estimated bmd for each of the bootstrap data sets as returned by bootstrapBmd(); default value is NULL

bootstrapModelResults

list with for each of the bootstrap data sets results of the fitted model; should contain at least see param modelResults above; as returned by bootstrapBmd(); default value is NULL

confidenceLevel

numeric, defines constructed confidence interval for bmd, e.g. if 0.9 then lower and upper bound of 90 default value is 0.9

naiveApproach

boolean, TRUE if the model-averaged BMD is estimated as the weighted average of bmd values, FALSE if the model-averaged BMD is estimated based on weighted average of response values; default value is FALSE

Value

no return value; plot is written to the current device


alfcrisci/bmdModeling documentation built on May 28, 2019, 12:32 a.m.