Statistical Methods for Analysing Multivariate Abundance Data

anova.manyany | Analysis of Deviance for Many Univariate Models Fitted to... |

anova.manyglm | Analysis of Deviance for Multivariate Generalized Linear... |

anova.manylm | ANOVA for Linear Model Fits for Multivariate Abundance Data |

anova.traitglm | Testing for a environment-by-trait (fourth corner)... |

antTraits | Ant data, with species traits |

best.r.sq | Use R^2 to find the variables that best explain a... |

boxplot.mvabund | Boxplots for multivariate abundance Data |

coefplot.manyglm | Plots the coefficients of the covariates of a manyglm object... |

cv.glm1path | Fits a path of Generalised Linear Models with LASSO (or L1)... |

deviance.manylm | Model Deviance |

extend.x.formula | Extend a Formula to all of it's Terms |

formulaUnimva | Create a List of Univariate Formulas |

glm1 | Fits a Generalised Linear Models with a LASSO (or L1)... |

glm1path | Fits a path of Generalised Linear Models with LASSO (or L1)... |

logLik.manylm | Calculate the Log Likelihood |

manyany | Fitting Many Univariate Models to Multivariate Abundance Data |

manyglm | Fitting Generalized Linear Models for Multivariate Abundance... |

manylm | Fitting Linear Models for Multivariate Abundance Data |

manylm.fit | workhose functions for fitting multivariate linear models |

meanvar.plot | Construct Mean-Variance plots for Multivariate Abundance Data |

mvabund | Multivariate Abundance Data Objects |

mvabund-internal | Internal mvabund Objects |

mvabund-package | Statistical methods for analysing multivariate abundance data |

mvformula | Model Formulae for Multivariate Abundance Data |

plot.manyany | Plot Diagnostics for a manyany or glm1path Object |

plot.manylm | Plot Diagnostics for a manylm or a manyglm Object |

plot.mvabund | Plot Multivariate Abundance Data and Formulae |

plotMvaFactor | Draw a Mvabund Object split into groups. |

predict.manyglm | Predict Method for MANYGLM Fits |

predict.manylm | Model Predictions for Multivariate Linear Models |

predict.traitglm | Predictions from fourth corner model fits |

residuals.manyglm | Residuals for MANYGLM, MANYANY, GLM1PATH Fits |

ridgeParamEst | Estimation of the ridge parameter |

shiftpoints | Calculate a shift for plotting overlapping points |

solberg | Solberg Data |

spider | Spider data |

summary.manyglm | Summarizing Multivariate Generalized Linear Model Fits for... |

summary.manylm | Summarizing Linear Model Fits for Multivariate Abundance Data |

Tasmania | Tasmania Dataset |

tikus | Tikus Island Dataset |

traitglm | Fits a fourth corner model for abundance as a function of... |

unabund | Remove the mvabund Class Attribute |

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