compareROC: Make ROC plots.
In alkalait/gprege: Gaussian Process Ranking and Estimation of Gene Expression time-series
Description
Usage
Arguments
Value
See Also
Examples
Description
This rocStats wrapper superimposes ROC curves on a plot to analyse the output performance of a method-A, and optionally compare it with that
of a method-B, based on some ground thruth labels.
Usage
1
compareROC(output, groundTruthLabels, compareToRanking)
Arguments
output
(vector) The output of ranking scores returned by method-A for each data-point.
groundTruthLabels
(vector) A binary vector that contains the ground truth (e.g. which genes are members of the top-100 ground truth list).
compareToRanking
A matrix where each column is the output vector of ranking scores returned by another competing method.
Value
area
A scalar. The area under the ROC curve of method-A.
See Also
Examples
1
2
data(FragmentDellaGattaData) ## Load demo data.
compareROC(output= rnorm(length(DGatta_labels_byTSNI))>0, groundTruthLabels=DGatta_labels_byTSNI)
alkalait/gprege documentation built on May 10, 2019, 9:18 a.m.
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Description Usage Arguments Value See Also Examples
Description
This rocStats wrapper superimposes ROC curves on a plot to analyse the output performance of a method-A, and optionally compare it with that of a method-B, based on some ground thruth labels.
Usage
1 | compareROC(output, groundTruthLabels, compareToRanking)
|
Arguments
output |
(vector) The output of ranking scores returned by method-A for each data-point. |
groundTruthLabels |
(vector) A binary vector that contains the ground truth (e.g. which genes are members of the top-100 ground truth list). |
compareToRanking |
A matrix where each column is the output vector of ranking scores returned by another competing method. |
Value
area |
A scalar. The area under the ROC curve of method-A. |
See Also
Examples
1 2 | data(FragmentDellaGattaData) ## Load demo data.
compareROC(output= rnorm(length(DGatta_labels_byTSNI))>0, groundTruthLabels=DGatta_labels_byTSNI)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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