CG: CG content function

Description Usage Arguments Examples

Description

This function allows you calculate the fraction of C and G content of a specified sequence.

Usage

1

Arguments

sequence

a single vector of individual character

wordsize

the length of characters to include in nucleotide "word" search; for CG this is 2

alphabet

all characters within the seqence to analyze

Examples

1
CG(FISHsequence, wordsize= 2, alphabet= c("a", "c", "t", "g"))

allisondavis/DNAanalysis_PACKAGE documentation built on May 14, 2019, 12:52 a.m.