lat2800_to_dataset: Convert Lat2800 biologger data to Arrow dataset

In allisonglider/seabiRds: Prepares biologging data for analysis and upload to the lab database

Convert Lat2800 biologger data to Arrow dataset

Description

Reads Lat2800 biologger data and parses it into three arrow datasets for TDR data

Usage

lat2800_to_dataset(
  files,
  deployments,
  output_dataset,
  date_format = "%Y-%m-%d %H:%M:%OS",
  plot = T,
  max_rows,
  timezone = "UTC"
)

Arguments

files	List of Lat2800 .csv files, data must have file names that are a partial match to the dep_id in deployment data
deployments	Deployment data formatted using seabiRds::formatDeployments()
output_dataset	Path where arrow dataset should be saved
date_format	The POSIXct date format used in .csv files
plot	Should plot of data be generated, TRUE or FALSE?
max_rows	Maximum rows to read in, LAT2800 units sometimes fill memory with rows of invalid data that are too long to read in
timezone	Timezone of raw data, default is UTC

allisonglider/seabiRds documentation built on Feb. 14, 2025, 7:37 a.m.