binarize_and_transpose: Binarize and transpose the phylogenomic profile matrix
In almeidasilvaf/syntenet: Inference And Analysis Of Synteny Networks
View source: R/07_microsynteny-based_phylogeny.R
binarize_and_transpose R Documentation
Binarize and transpose the phylogenomic profile matrix
Description
Binarize and transpose the phylogenomic profile matrix
Usage
binarize_and_transpose(profile_matrix = NULL)
Arguments
profile_matrix
A matrix with phylogenomic profiles obtained
with phylogenomic_profile.
Value
A binary and transposed version of the profiles matrix.
Examples
data(clusters)
profile_matrix <- phylogenomic_profile(clusters)
tmat <- binarize_and_transpose(profile_matrix)
almeidasilvaf/syntenet documentation built on March 23, 2024, 8:27 a.m.
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View source: R/07_microsynteny-based_phylogeny.R
| binarize_and_transpose | R Documentation |
Binarize and transpose the phylogenomic profile matrix
Description
Binarize and transpose the phylogenomic profile matrix
Usage
binarize_and_transpose(profile_matrix = NULL)
Arguments
profile_matrix |
A matrix with phylogenomic profiles obtained
with |
Value
A binary and transposed version of the profiles matrix.
Examples
data(clusters)
profile_matrix <- phylogenomic_profile(clusters)
tmat <- binarize_and_transpose(profile_matrix)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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