almutlue/CellMixS: Evaluate Cellspecific Mixing

CellMixS provides metrics and functions to evaluate batch effects, data integration and batch effect correction in single cell trancriptome data with single cell resolution. Results can be visualized and summarised on different levels, e.g. on cell, celltype or dataset level.

Getting started

Package details

Bioconductor views BatchEffect GeneExpression SingleCell Transcriptomics
Maintainer
LicenseGPL (>=2)
Version1.7.1
URL https://github.com/almutlue/CellMixS
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("almutlue/CellMixS")
almutlue/CellMixS documentation built on Dec. 22, 2020, 11:07 a.m.