annotate_hybrids: Annotate hybrids
In amchakra/toscatools: Tosca proximity ligation pipeline toolkit
View source: R/annotate_hybrids.R
annotate_hybrids R Documentation
Annotate hybrids
Description
Annotates hybrids.dt using iCount regions.gtf file (generated by iCount segment)
Usage
annotate_hybrids(hybrids.dt, regions.gr)
Arguments
hybrids.dt
Hybrids data.table
regions.gr
iCount regions.gtf file as GRanges
Value
hybrids.dt annotated with region, gene_id, gene_name and biotype columns
amchakra/toscatools documentation built on Nov. 26, 2022, 12:35 p.m.
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View source: R/annotate_hybrids.R
| annotate_hybrids | R Documentation |
Annotate hybrids
Description
Annotates hybrids.dt using iCount regions.gtf file (generated by iCount segment)
Usage
annotate_hybrids(hybrids.dt, regions.gr)
Arguments
hybrids.dt |
Hybrids data.table |
regions.gr |
iCount regions.gtf file as GRanges |
Value
hybrids.dt annotated with region, gene_id, gene_name and biotype columns
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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