Files in amitjavilaventura/seqViewR
Visualization of Omics And Sequencing Data In R
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DESCRIPTION
LICENSE
NAMESPACE
R/DEcompare.R
R/barAnno.R
R/barDEGs.R
R/chromReads.R
R/chromRegions.R
R/circleRegions.R
R/compareCounts.R
R/expressionCor.R
R/expressionHeatmap.R
R/expressionHeatmap2.R
R/expressionHeatmapBar.R
R/getVennCounts.R
R/ggUpsetPeaks.R
R/ggVennBed.R
R/ggVennPeaks.R
R/plotDendogram.R
R/upsetPeaks.R
R/volcanoPlot.R
README.md
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docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/DEcompare.html
docs/reference/barAnno.html
docs/reference/barDEGs.html
docs/reference/chromReads.html
docs/reference/chromRegions.html
docs/reference/circleRegions.html
docs/reference/compareCounts.html
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man/DEcompare.Rd
man/barAnno.Rd
man/barDEGs.Rd
man/chromReads.Rd
man/chromRegions.Rd
man/circleRegions.Rd
man/compareCounts.Rd
man/expressionCor.Rd
man/expressionHeatmap.Rd
man/expressionHeatmap2.Rd
man/expressionHeatmapBar.Rd
man/getVennCounts.Rd
man/ggUpsetPeaks.Rd
man/ggVennBed.Rd
man/ggVennPeaks.Rd
man/plotDendogram.Rd
man/upsetPeaks.Rd
man/volcanoPlot.Rd
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-180x180.png
pkgdown/favicon/apple-touch-icon-60x60.png
pkgdown/favicon/apple-touch-icon-76x76.png
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pkgdown/favicon/favicon-16x16.png
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plotmics.Rproj
testdata/.DS_Store
testdata/condition1_diff_exp.tsv
testdata/condition2_diff_exp.tsv
testdata/condition3_diff_exp.tsv
testdata/intersection.png
testdata/mm10.chrom.sizes
testdata/mm10.chrom.sizes2
testdata/mm10.cytoBand.txt
testdata/mm10.regions.tsv
testdata/mm10.regions2.tsv
testdata/mm10.regions3.tsv
testdata/peaksX.tsv
testdata/peaksY.tsv
testdata/regionsX.bed
testdata/regionsY.bed
testdata/sampleX.bam
testdata/sampleX.bam.bai
testdata/tpm.tsv
vignettes/00-install_and_sessioninfo.Rmd
vignettes/01-chromReads.Rmd
vignettes/02-barDEGs.Rmd
vignettes/03-volcanoPlot.Rmd
vignettes/04-DEcompare.Rmd
vignettes/05-barAnno.Rmd
vignettes/06-upSetPeaks.Rmd
vignettes/07-ggUpsetPeaks.Rmd
vignettes/08-ggVennPeaks.Rmd
vignettes/09-expressionHeatmap.Rmd
vignettes/10-expressionHeatmap2.Rmd
vignettes/11-chromRegions.Rmd
vignettes/12-circleRegions.Rmd
vignettes/13-ggVennBed.Rmd
vignettes/14-expressionCor.Rmd
