PNdistrPlot: Create an image with boxplots of positive and negative...
In ammar257ammar/ArrayAnalysis-Bioconductor: ArrayAnalysis
View source: R/functions_imagesQC.R
PNdistrPlot R Documentation
Create an image with boxplots of positive and negative control intensities
Description
This function (from functions_imagesQC.R) creates an image with
boxplots of positive and negative control intensities for each array.
It calls the borderQC1 function (affyQCReport Bioconductor package).
Usage
PNdistrPlot(Data, WIDTH = 1000, HEIGHT = 1414, POINTSIZE = 24)
Arguments
Data
(Status: required) The raw data object (datatype: AffyBatch)
WIDTH
(Status: optional, Default:1000) png image width (datatype: number)
HEIGHT
(Status: optional, Default:1414) png image height (datatype: number)
POINTSIZE
(Status: optional, Default:24) png image point size (datatype: number)
Value
A PNG image of boxplots of positive and negative control intensities, called "RawDataPosNegDistribPlot"
Examples
# PNdistrPlot(rawData)
ammar257ammar/ArrayAnalysis-Bioconductor documentation built on Jan. 29, 2024, 7:21 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/functions_imagesQC.R
| PNdistrPlot | R Documentation |
Create an image with boxplots of positive and negative control intensities
Description
This function (from functions_imagesQC.R) creates an image with boxplots of positive and negative control intensities for each array. It calls the borderQC1 function (affyQCReport Bioconductor package).
Usage
PNdistrPlot(Data, WIDTH = 1000, HEIGHT = 1414, POINTSIZE = 24)
Arguments
Data |
(Status: required) The raw data object (datatype: AffyBatch) |
WIDTH |
(Status: optional, Default:1000) png image width (datatype: number) |
HEIGHT |
(Status: optional, Default:1414) png image height (datatype: number) |
POINTSIZE |
(Status: optional, Default:24) png image point size (datatype: number) |
Value
A PNG image of boxplots of positive and negative control intensities, called "RawDataPosNegDistribPlot"
Examples
# PNdistrPlot(rawData)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.