ImputeBaseline: Impute using average expression across all cells

Description Usage Arguments Value

View source: R/Impute.R

Description

ImputeBaseline imputes dropouts using gene averages across cells. Zero values are excluded from the mean computation.

Usage

1

Arguments

data

matrix with entries equal to zero to be imputed, normalized and log2-transformed (genes as rows and samples as columns)

write

logical; should a file with the imputation results be written?

...

additional arguments to saveRDS

Value

matrix; imputation results considering the average expression values of genes


anacarolinaleote/ADImpute documentation built on May 18, 2021, 10:11 p.m.