MTPubMed: Extract XML from PubMed

In andrewbrownphd/MetaTurkR: Functions to Support Metaresearch with MTurkR

Description

Extract XML from PubMed

Usage

MTPubMed(pmids = NULL, recordContent = NULL, xpaths = NULL,
  outNames = NULL)

Arguments

pmids	PubMed IDs
recordContent	String or vector of common-name PubMed record elements, such authors, abstract, title, and registry.
xpaths	String or vector of actual xpaths, such as '//AccessionNumber'
outNames	Colnames for the output object. If recordContent is defined but outNames is undefined, the function will take use recordContent as the column names.

Details

Specific values are available for recordContent, and the list will grow:

• pmid

• receivedDate

• acceptedDate

• aheadOfPrintDate

• eCollectionDate

• ePublishDate

• pubDate

• eArticleDate

• abstract

• doi

• registry

andrewbrownphd/MetaTurkR documentation built on Nov. 23, 2019, 4:17 p.m.