Man pages for andrewparkermorgan/mouser
Colour Schemes and Constants Related to Mouse Genetics
| cc_colors | Canonical colour scheme for the founder strains of the... |
| cc_diplotypes | Return CC diplotypes in canonical order |
| cc_strains | Get the list of founder strains of the Collaborative Cross... |
| chrom_colors | Canonical colour scheme for denoting autosomes vs X... |
| chromnames | Just return chromosome names. |
| chromsizes | Get chromosome lengths for a specific genome build. |
| chromsizes_cM | Chromosome lengths in cM. |
| chromsizes_mm10 | Shortcut to chromosome lengths for genome build mm10. |
| chromsizes_mm9 | Shortcut to chromosome lengths for genome build mm9. |
| factor_chrom | Create a factor whose levels are chromosome names. |
| factor_chromtype | Classify chromosmes as X or autosome |
| factor_sex | Classify sex in systematic way |
| is_outgroup | Test if the listed taxa are outgroups with respect to Mus... |
| legend_inside | Move the legend inside plotting area |
| linearize_genome | Lay chromosomes out end-to-end and re-calculate position of... |
| mus_colors | Canonical colour scheme for Mus taxa |
| mus_taxa | Get a list of taxa in the genus Mus |
| palettes | Color palettes related to mouse genetics for use with... |
| pseudoautosomal_boundary | Return position of pseudoautosomal boundary on X chromosome |
| scale_x_linearized_genome | Draw x-axis for concatenated chromosomes |
| scale_x_power10 | Format axis labels as powers of 10 |
| scale_y_power10 | Format axis labels as powers of 10 |
| sex_colors | Canonical colour scheme for denoting male/female sex |
| sex_colors_lighter | Lighter colour scheme for denoting male/female sex |
| theme_classic2 | The "classic" scheme of 'ggplot2', with axis-line issue fixed... |
