pseudoautosomal_boundary: Return position of pseudoautosomal boundary on X chromosome

In andrewparkermorgan/mouser: Colour Schemes and Constants Related to Mouse Genetics

Return position of pseudoautosomal boundary on X chromosome

Description

Return position of pseudoautosomal boundary on X chromosome

Usage

pseudoautosomal_boundary(build = c("mm9", "mm10", "37", "38", "NCBIm37",
  "GRCm38"), ...)

PAR_mm9(...)

PAR_mm10(...)

scale_x_Mb(name = "position (Mb)", ...)

scale_y_Mb(name = "position (Mb)", ...)

Arguments

build	genome build: see ?chromsizes for options
...	ignored

Value

a vector of length two, with the canonical boundary of pseudoautosomal region (PAR) as well as its shifted boundary

References

White MW, Ikeda A, Payseur BA (2011) A pronounced evolutionary shift of the pseudoautosomal region boundary in house mice. Mammalian Genome 23: 455-466. doi:10.1007/s00335-012-9403-5

andrewparkermorgan/mouser documentation built on May 14, 2022, 8:06 p.m.