hpaXmlAntibody: Extract antibody information

In anhtr/HPAanalyze: Retrieve and analyze data from the Human Protein Atlas

Extract antibody information

Description

Extract information about the antibodies used for a specific protein. It is important to note that the data that HPA provides on their website and through xml files are not one-to-one equivalents.

Usage

hpaXmlAntibody(importedXml)

Arguments

importedXml

Input an xml document object resulted from a hpaXmlGet() call.

Value

This function returns a tibble of 4 columns, containing information about the antibodies used in the project for the inquired protein: id, releaseDate, releaseVersion, and RRID.

See Also

Other xml functions: hpaXml(), hpaXmlGet(), hpaXmlProtClass(), hpaXmlTissueExpr(), hpaXmlTissueExprSum()

Examples

  GCH1xml <- hpaXmlGet('ENSG00000131979')
  hpaXmlAntibody(GCH1xml)

anhtr/HPAanalyze documentation built on June 9, 2025, 10:55 p.m.