extr_sedmap_data: Extract sedmap data

In annakrystalli/sedMaps: Visualise, manipulate and access sediment and disturbance data.

Description

Extract sedmap data

Usage

extr_sedmap_data(rst, sf, select_rst = NULL, select_sf = NULL,
  output = c("summaries", "csv", "raster"), fun = c("mean", "min",
  "max", "median", "sd"), sf_crs = FALSE, out_dir,
  rst_out_format = c("stack", "tiff"), select_sf_csv = FALSE,
  attributes, varnames)

Arguments

rst	sedmaps data raster stack
sf	extraction simple feature
select_rst	raster layers to be extracted
select_sf	sf layers to use for extraction
output	character vector of extraction output formats
fun	summary functions to apply for each data x extraction layer. sd ignored for points
sf_crs	whether output data should be converted to the sf crs
out_dir	path to output directory
rst_out_format	whether raster data should be return as a .grd raster stack or individual geoTIFF layers
select_sf_csv	whether to additionally include extraction sf metadata as in .csv format
attributes	dataspice attributes table
varnames	varnames list

Value

outputs written out to out_dir.

annakrystalli/sedMaps documentation built on June 22, 2021, 1:11 a.m.