plot.gtm: Plot Grouped Tissue Model

In anthony-aylward/asepirinen: Assessing allele-specific expression across multiple tissues from RNA-seq read data

Description

a plot

Usage

## S3 method for class 'gtm'
plot(res, y, title.text = NULL, print.counts = TRUE,
  cex.c = 1)

Arguments

res	list, as returned by function 'gtm'
y	mx2 matrix of allele read counts, col 1 for reference allele, col 2 for non ref allele allele, uses rownames as labels if present
title.text	if present uses as a title in the plot
print.counts	if TRUE, prints out the read counts in the form NONREF/ALL, if FALSE does not print counts

anthony-aylward/asepirinen documentation built on May 13, 2019, 11:29 a.m.