npbin_preprocess_file: Preprocess allele count data, handling a header if necessary.
In anthony-aylward/npbin:
Description
Usage
Arguments
Details
Value
See Also
Description
This function wraps npbin_preprocess_counts with header handling.
Usage
1
npbin_preprocess_file(file_path, minimum_coverage = 5)
Arguments
data_frame
A data frame containing required fields for NPBin analysis
Details
Checks if the input data includes a header by checking column types of
the input data frame. If a header is present, the indices of the required
fields are noted and used with npbin_preprocess_counts. Finally, the
data frame is converted to a data table.
Value
A data frame formatted for NPBin analysis
See Also
get_header_indices,
npbin_preprocess_counts, convert_to_data_table
anthony-aylward/npbin documentation built on Aug. 22, 2019, 8:08 a.m.
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Description Usage Arguments Details Value See Also
Description
This function wraps npbin_preprocess_counts with header handling.
Usage
1 | npbin_preprocess_file(file_path, minimum_coverage = 5)
|
Arguments
data_frame |
A data frame containing required fields for NPBin analysis |
Details
Checks if the input data includes a header by checking column types of
the input data frame. If a header is present, the indices of the required
fields are noted and used with npbin_preprocess_counts. Finally, the
data frame is converted to a data table.
Value
A data frame formatted for NPBin analysis
See Also
get_header_indices,
npbin_preprocess_counts, convert_to_data_table
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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