approximate_strauss_constant | Approximate Strauss constant (master function) |
approximate_strauss_constant_OT | approximate Strauss constant using Ogata&Tanemura approx. |
approximate_strauss_constant_penttinen | approximate Strauss constant using Penttinen84 approx. |
approximate_strauss_constant_PS | approximate Strauss constant using Path sampling |
approximate_strauss_constant_R | approximate unconditional Strauss constant using Gaussian... |
approximate_strauss_constant_R3 | approximate Strauss constant using Gaussian approx. of the... |
bbox_cut | Cut coordinates with a bbox |
bbox_dilate | dilate bbox |
bbox_distance | distance from points to bbox border |
bbox_erode | Erode a 3d box |
bbox_volume | bbox volume |
convert_to_pp | Interpret data |
cutgeom | Cut the edges of from a geometric graph |
dstrauss | density of a strauss process |
fgibbs | Fit stationary and isotropic exp-family Gibbs process in 2D... |
fgibbs.logistic | Fit exp-Gibbs processes to data using Logistic likelihood... |
flennardjones.logistic | Fit Lennard-Jones process to data using Logistic likelihood... |
fstrauss | Fit stationary and isotropic Strauss process in 2D and 3D |
fstrauss.bayes | Bayesian inference for stationary Strauss process |
fstraussbiv.logistic | Fit bivariate Strauss process to data using Logistic... |
fstrauss.direct | Fit Strauss process to data using maximum approx. likelihood |
fstrauss.logistic | Fit Strauss process to data using Logistic likelihood method |
fstrauss.profile | Profile pseudolikelihood for Strauss |
fstrauss.vb | Mean field fit of Strauss process using pseudolikelihood... |
fstrauss.vbll | Mean field fit of Strauss process using logistic likelihood... |
geom | geometric graph |
gibbs_pot | Computes the sufficient statistics for exp-Gibbs models |
gibbs_pot.lennardjones | lennard-jones |
gibbs_pot.strauss | strauss |
LambertW | Lambert's W function order 0 |
marginal_likelihood | Compute the marginal likelihood for Bayesian Strauss... |
print.gibbsfit | Fit result object |
print.straussfit | Fit result object |
rstrauss | Simulate Strauss process in 2- or 3-dimensional box |
rstrauss_c | internal call |
strauss_beta | Solve beta for Strauss given on n,gamma,range |
strauss_intensity | Approximate intensity for Strauss based on beta,gamma,range |
strauss_pcf | Pair correlation bounds given beta, gamma, R, lambda |
strauss_theory | Theoretical maximum for the range parameter for hard core |
vblogit | Fit logistic regression model using VB approximation |
vbstrauss | Mean field fit of Strauss process using pseudolikelihood... |
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