peaks.annotaions: peaks.annotaions
In anton-tsukanov/ClanChiPeaks: Cluster analisys of ChIP-seq peaks
Description
Usage
Arguments
Value
View source: R/peaks.annotations.R
Description
Counting of peaks in genome
Usage
1
peaks.annotaions(peaks, ref, is.Ratio = T)
Arguments
peaks
is a GenomeRanges object with matadata colum that is named 'TF' (TF - Transcroption factor) and contain name for each peaks
ref
is TxDb object
is.Ratio
if False returns a number of peaks in diff regions, if False returns proportions of peaks in diif regions
Value
data.frame
anton-tsukanov/ClanChiPeaks documentation built on Oct. 29, 2019, 2:12 a.m.
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Description Usage Arguments Value
View source: R/peaks.annotations.R
Description
Counting of peaks in genome
Usage
1 | peaks.annotaions(peaks, ref, is.Ratio = T)
|
Arguments
peaks |
is a GenomeRanges object with matadata colum that is named 'TF' (TF - Transcroption factor) and contain name for each peaks |
ref |
is TxDb object |
is.Ratio |
if False returns a number of peaks in diff regions, if False returns proportions of peaks in diif regions |
Value
data.frame
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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