plot_quality: Plot quality metrics
In antonvsdata/notame: Workflow for non-targeted LC-MS metabolic profiling
View source: R/qc_visualizations.R
plot_quality R Documentation
Plot quality metrics
Description
Plots distribution of each quality metric, and a distribution of the flags.
Usage
plot_quality(object, all_features = FALSE, plot_flags = TRUE)
Arguments
object
a MetaboSet object
all_features
logical, should all features be used? If FALSE (the default),
flagged features are removed before visualization.
plot_flags
logical, should the distribution of flags be added as a barplot?
Value
a ggplot object
Examples
plot_quality(example_set)
antonvsdata/notame documentation built on Sept. 14, 2024, 11:09 p.m.
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View source: R/qc_visualizations.R
| plot_quality | R Documentation |
Plot quality metrics
Description
Plots distribution of each quality metric, and a distribution of the flags.
Usage
plot_quality(object, all_features = FALSE, plot_flags = TRUE)
Arguments
object |
a MetaboSet object |
all_features |
logical, should all features be used? If FALSE (the default), flagged features are removed before visualization. |
plot_flags |
logical, should the distribution of flags be added as a barplot? |
Value
a ggplot object
Examples
plot_quality(example_set)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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