Files in aquaflakes/fjComm
What the Package Does in One 'Title Case' Line

.DS_Store
.Rbuildignore
._.DS_Store
._Readme.Rmd
.gitignore
.project
.settings/de.walware.statet.r.core.prefs
DESCRIPTION
NAMESPACE
R/.DS_Store
R/._.DS_Store
R/2017_03_20_ggplot_predifined.R R/2017_03_20_seq_alignment.R R/2017_04_20_parallel.R R/2017_04_27_SELEX_utilities.R R/2017_05_04_motif_related.R R/2017_05_04_motif_related_Rver.R R/2017_05_04_motif_related_plot.R R/2017_05_FT_related.R R/2017_06_19_Nu_manuscript.R R/2018_01_gRange_utilities.R R/2019_04_05_ggplot_predifined2.R R/2019_04_SELEX_dbop.R R/2019_05_SELEX_localMax.R R/2019_05_SELEX_topModes.R R/2019_07_12_knit_funs.R R/2019_09_ShortRead_op.R R/2019_09_biomart.R R/2019_10_NN_energy.R R/IC_related.R R/Math.R
R/Math.html
R/R_utility.R R/RcppExports.R R/TF_related.R R/_TESTER.R R/__roxygen_template.R R/circular.R R/class_seqFile.R R/class_seqFile_SELEXFile.R R/class_seqFile_bedFile.R R/commRDatafun.R R/commRfun.R R/custom_op.R R/excel_utility.R R/fileIO.R R/ggplot2_theme_and_basic.R R/guideFile.R R/not_yet_used/._gg_scale_range.R R/not_yet_used/FPK-V13-13 (Analysis).R R/not_yet_used/gg_scale_range.R R/not_yet_used/kcnt_wrapper.R R/qPCR.R R/sequence_op.R R/tmpFasta.R
R/useful_fragments/._.DS_Store
R/useful_fragments/biomart.R R/zzz.R
Read-and-delete-me
Readme.Rmd _otherScripts/maxBiasPair_allpos.R
_src_oldver/armatest.cpp
_src_oldver/kcnt_bit_o.cpp
_src_oldver/kcnt_bit_v1.cpp
_src_oldver/kcnt_bit_v2_arma.cpp
extdata/.DS_Store
extdata/._.DS_Store
extdata/NC_001422.1.fa
extdata/NC_001422.1.fa.Rbowtie/bowtieIndex.1.ebwt
extdata/NC_001422.1.fa.Rbowtie/bowtieIndex.2.ebwt
extdata/NC_001422.1.fa.Rbowtie/bowtieIndex.3.ebwt
extdata/NC_001422.1.fa.Rbowtie/bowtieIndex.4.ebwt
extdata/NC_001422.1.fa.Rbowtie/bowtieIndex.rev.1.ebwt
extdata/NC_001422.1.fa.Rbowtie/bowtieIndex.rev.2.ebwt
extdata/NC_001422.1.fa.Rbowtie/ref_md5Sum.txt
extdata/NC_001422.1.fa.fai
extdata/NC_001422.1.fa.md5
extdata/auxiliaries.txt
extdata/bis_1_1.fa.bz2
extdata/chip_1_1.fq.bz2
extdata/chip_1_1_ca65174b9c7.bam
extdata/chip_1_1_ca65174b9c7.bam.bai
extdata/chip_1_1_ca65174b9c7.bam.txt
extdata/chip_1_1_d6c52b86d58.bam
extdata/chip_1_1_d6c52b86d58.bam.bai
extdata/chip_1_1_d6c52b86d58.bam.txt
extdata/chip_1_1_d6c7034d4fa.bam
extdata/chip_1_1_d6c7034d4fa.bam.bai
extdata/chip_1_1_d6c7034d4fa.bam.txt
extdata/chip_2_1.fq.bz2
extdata/chip_2_1_ca64650e198.bam
extdata/chip_2_1_ca64650e198.bam.bai
extdata/chip_2_1_ca64650e198.bam.txt
extdata/chip_2_1_d6c1c8aa2a3.bam
extdata/chip_2_1_d6c1c8aa2a3.bam.bai
extdata/chip_2_1_d6c1c8aa2a3.bam.txt
extdata/chip_2_1_d6c4a12d6d5.bam
extdata/chip_2_1_d6c4a12d6d5.bam.bai
extdata/chip_2_1_d6c4a12d6d5.bam.txt
extdata/hg19sub.fa
extdata/hg19sub.fa.Rbowtie/bowtieIndex.1.ebwt
extdata/hg19sub.fa.Rbowtie/bowtieIndex.2.ebwt
extdata/hg19sub.fa.Rbowtie/bowtieIndex.3.ebwt
extdata/hg19sub.fa.Rbowtie/bowtieIndex.4.ebwt
extdata/hg19sub.fa.Rbowtie/bowtieIndex.rev.1.ebwt
extdata/hg19sub.fa.Rbowtie/bowtieIndex.rev.2.ebwt
extdata/hg19sub.fa.Rbowtie/ref_md5Sum.txt
extdata/hg19sub.fa.fai
extdata/hg19sub.fa.md5
extdata/hg19sub_annotation.gtf
extdata/hg19sub_snp.txt
extdata/mirbaseXX_qsr.gff3
extdata/mirna_1.fa
extdata/phiX_paired_withSecondary.bam
extdata/phiX_paired_withSecondary.bam.bai
extdata/phiX_paired_withSecondary_sampleFile.txt
extdata/rna_1_1.fq.bz2
extdata/rna_1_2.fq.bz2
extdata/rna_2_1.fq.bz2
extdata/rna_2_2.fq.bz2
extdata/samples_bis_single.txt
extdata/samples_chip_single.txt
extdata/samples_mirna.txt
extdata/samples_rna_paired.txt
extdata/samples_rna_single.txt
fjComm-package.Rd
fjComm.Rproj
man/adda.Rd man/fjComm-package.Rd man/hello.Rd man/rcpp_hello_world.Rd
src/.DS_Store
src/._.DS_Store
src/RcppExports.cpp
src/_bk/common_op.cpp
src/_bk/common_op.h
src/_bk/kcnt_bit.cpp
src/_testCpp.cpp
src/basic.cpp
src/chrScore.cpp
src/k_match_PWM.cpp
src/kcnt.cpp
src/kcnt_bit.cpp
src/seed_to_pfm.cpp
src/sequenceOp.cpp
aquaflakes/fjComm documentation built on Nov. 6, 2019, 1:04 p.m.