R/data.R

#' Example reads per cell barcode data
#'
#' Simulated reads counts per cell barcode data as created by BAMTagHistogram
#' from Drop-seq tools available through the
#' [McCarroll lab page](http://mccarrolllab.com/dropseq/).
#'
#' @format data.frame
"reads_per_cell_barcode"

#' Example mixed-species DGE summary information
#'
#' Merged DigitalExpression summary files of a species mixing experiment from
#' [Macosko et al., 2015]("https://www.ncbi.nlm.nih.gov/pubmed/26000488). This
#' dataset only contains a sample of the full data. The format is equal to the
#' output of using \link[dropseqr]{read_ms_dge_summary} to merge the individual
#' summary files of each species.
#'
#' @format data.frame
"ms_dge_summary"

#' Example mixed-species DGE data
#'
#' Merged DigitalExpression data of a species mixing experiment from
#' [Macosko et al., 2015]("https://www.ncbi.nlm.nih.gov/pubmed/26000488). This
#' dataset only contains a sample of the full data. The format is equal to the
#' output of using \link[dropseqr]{read_ms_dge_files} to merge the individual
#' summary files of each species.
#'
#' @format data.frame
"ms_dge_data"
argschwind/dropseqr documentation built on May 23, 2019, 4:24 p.m.