armbrustlab/clusterPop: Cluster Phytoplankton populations

The package performs classification of phytoplankton populations based on k-means clustering algorithm and customizable parameters used to define the pre-gating regions. The package can analyzed a serie of continuous flow cytometry data files, where the classification results of the previous file are used to classify the populations in the next file.

Getting started

Package details

AuthorFrancois Ribalet <[email protected]>
MaintainerFrancois Ribalet <[email protected]>
LicenseGPL (>= 2)
Version3.0
URL http://seaflow.ocean.washington.edu
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("armbrustlab/clusterPop")
armbrustlab/clusterPop documentation built on April 8, 2018, 3:29 a.m.