Man pages for arnijohnsen/arjtools
Collection of tools used in copy number variation analysis
| caai | Complex arm-wise aberration index (CAAI) |
| coord_to_arm | Genomic coordinate to chromosome arm |
| cytoband_map | Information about cytobands in 5 most recent assemblies |
| dt_to_385k | Converts aCGH data to hg18 385k design |
| hg17_385k_pos | Location of probes in hg17 385k design array |
| hg17_hg18_map | Map from probes in hg17 385k array design to locations in... |
| hg18_385k_pos | Location of probes in hg18 385k design array |
| kcmakefilter | Create index from sig_region object |
| kcsmooth | Smooth samples with KCsmart algorithm |
| probe_to_385k | Finds nearest probe on hg18_385k |
| waai | Whole-arm aberration index (WAAI) |
