GetMDCData | R Documentation |
Get Cell-by-Cell segmentation data stored in MDCStore database given uniqueID
GetMDCData(
SERVER = "MDCStore",
ID = "moldev",
PWD = "moldev",
MeasurementID,
getsite = T,
TimeCourse = F
)
SERVER |
the odbc connexion to MDCStore database |
ID |
the identifiant for connexion |
PWD |
the password for connexion |
MeasurementID |
the uniqueID created by MetaXpress/PowerCore segmentation |
getsite |
Shall siteID be added to data set ? |
TimeCourse |
Is it a timecourse experiment? |
A data.frame with cell-by-cell data stemming from MetaXpress/PowerCore segmentation
Allan Sauvat, allan.sauvat@gustaveroussy.fr
GetMDCInfo
#Not running
DB = GetMDCInfo(SERVER = 'MDCStore',ID = 'sa', PWD = '***')
UniqueIDs=DB$MeasurementID[grep(paste0(1500:1515,collapse='|'),DB$PlateID)]) #Get uniquesIDs from plate 1500 to 1515
MyData = lapply(UniqueIDs,function(x)GetMDCData(SERVER='YODA-SERVER',MeasurementID=x)) #Create a list that contains cellular data from each plate
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