burnin.thin: Burn-in and thinning of MCMC samples

In ashiklom/PEcAnRTM: PEcAn functions used for radiative transfer modeling

Description

Burn-in and thinning of MCMC samples

Usage

burnin.thin(
  samples,
  target = 5000,
  burnin.ratio = 2,
  auto = TRUE,
  burnin = NULL,
  thin = NULL
)

Arguments

samples	Matrix of MCMC samples
target	Target number of samples (default = 5000). Only applicable if auto=TRUE.
burnin.ratio	Fraction of samples to burn-in; i.e. 2 means to remove first 1/2 of samples, 3 means 1/3, etc. (default = 2). Only applicable if auto=TRUE.
auto	Whether or not to perform automatic burnin and thin based on target number of samples.
burnin	Number of samples to discard as burnin (auto must be FALSE)
thin	Thinning interval (auto must be FALSE)

ashiklom/PEcAnRTM documentation built on March 7, 2020, 7:46 a.m.