run_ed: Start an ED2 model run using 'processx'

In ashiklom/fortebaseline: Forest Resilience and Threshold Experiment (FoRTE) ED2 baseline runs source code and manuscript

Description

Start an ED2 model run using 'processx'

Usage

run_ed(
  casename,
  trait_values = list(),
  start_date = "1902-06-01",
  end_date = "1920-01-01",
  trait_plasticity = FALSE,
  multiple_scatter = FALSE,
  crown_model = FALSE,
  water_lim = TRUE,
  out_root = getOption("fortebaseline.ed_root"),
  ed_exe = fs::path(getOption("fortebaseline.ed_src_dir"), "ED", "build", "ed_2.1-opt"),
  ...
)

Arguments

casename	Name
trait_values	Named list of custom parameters
start_date, end_date	Run start and end dates. Default is 1902-06-01 to 1920-01-01.
trait_plasticity	Whether or not to enable the trait plasticity scheme (default = 'FALSE')
multiple_scatter	Whether or not to use the multiple-scattering canopy RTM. If 'FALSE' (default), use the two-stream RTM.
crown_model	Whether or not to use the finite canopy radius model (default = 'FALSE')
water_lim	Whether or not to run with water limitation to photosynthesis (default = 'TRUE').
out_root	Path to ED2 output root directory. Default is the option 'fortebaseline.ed_root', and if unset, "ed2-output" in the project root directory.
...	Additional ED2IN namelist settings. Must be in all caps, and must match settings in ED2IN.

Value

'processx' process for ED2 run.

Author(s)

Alexey Shiklomanov

ashiklom/fortebaseline documentation built on May 9, 2020, 1:56 a.m.