Analysis of Passive Acoustic Telemetry Data in 3D

bathymetry | Bathymetric raster |

burstInfo | Extract information from the names of movement bursts |

colorScale | Plot the color scale in a spatial chronogram plot |

contourPoly | Compute UD probability contours from 2D utilization... |

dateAxis | Plot the X axis of a spatial chronogram plot (dates) |

detect2matrix | Convert detection data into a matrix |

falseDetect | Identify false or spurious detections in acoustic telemetry... |

getDayNight | Classify the time stamps of a track into 'day' and 'night'... |

interpPath | Interpolate trajectory into points |

leastCostMap | Generate a least cost transition matrix from a topographical... |

overlap3d | Spatial overlap between several utilization distributions |

predictKde | Predict utilization distribution (UD) values from a 'kde'... |

probRaster | Create a raster of detection probabilities around a receiver |

range_test | Data from an acoustic signal range test experiment |

recColor | Assign colors to receivers |

receivers | Location of acoustic receivers in the Medes Islands |

sampleCoord | Sample pairs of coordinates from a probability raster |

shortPath | Get the shortest path between two points |

spatChronPlot | Make spatial chronogram plots with acoustic telemetry data |

syntPath | Generate synthetic trajectories of fishes from acoustic... |

tCol | Create colors with transparency |

thinData | Thin acoustic telemetry data |

timeAxis | Plot the Y axis of a spatial chronogram plot (times) |

tracking | Passive acoustic telemetry data of common dentex in the Medes... |

viewshed | Viewshed analysis output |

volOverlap | Spatial overlap between two utilization distributions |

volumeUD | Calculate utilization distribution probability volumes |

voxelize | Voxelize list of trajectories |

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