decTree: GPATree selected decision tree
In asthakhatiwada/GPATree: A package to implement the GPA-Tree method
Description
Usage
Arguments
Value
Author(s)
Description
This function will extract the combinations of functional annotations selected by the decision tree in the stage 2 of GPATree method that meets the provided threshold in minPredictedProb.
Usage
1
2
## S4 method for signature 'GPATree'
decTree(object)
Arguments
object
An object of class GPATree.
Value
A list containing variables in combinations selected by the decision tree (CART_PIs), the combination (CART_PIs_comb) and the predicted proportions for the selected PIs(assoc_pred) meet the provided threshold in minPredictedProb.
Author(s)
Aastha Khatiwada
asthakhatiwada/GPATree documentation built on March 8, 2021, 5:29 a.m.
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Description Usage Arguments Value Author(s)
Description
This function will extract the combinations of functional annotations selected by the decision tree in the stage 2 of GPATree method that meets the provided threshold in minPredictedProb.
Usage
1 2 | ## S4 method for signature 'GPATree'
decTree(object)
|
Arguments
object |
An object of class GPATree. |
Value
A list containing variables in combinations selected by the decision tree (CART_PIs), the combination (CART_PIs_comb) and the predicted proportions for the selected PIs(assoc_pred) meet the provided threshold in minPredictedProb.
Author(s)
Aastha Khatiwada
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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