Man pages for atamalu/GCalcium
A Data Manipulation and Analysis Package for Calcium Indicator Data

averaged_trialsAverages signals across trials
avg_curve_slopeGet average curve slopes
between_trial_changeCompare mean activity between trials
centered_AUCCompute centered area under curve
center_trialsCenters individual or multiple trials
consecutive_trial_changeCompare mean activity in consecutive trials
find_peaksGet peaks/valleys in waveform data
format_dataReformat and label data into GCalcium format
GCaMPFitted GCaMP fluorescence waveform data
inflect_pointsFind inflection pooints
inflect_points_dfFind inflection points and curve numbers
moving_windowSummarize data within windows of time
perc_baselineFind the percent change from baseline
plot_trialsPlot specified trials
within_trial_changeGet mean activity change within a trial
z_scoreTransform values into z scores
atamalu/GCalcium documentation built on July 12, 2019, 7:04 p.m.