centered_AUC: Compute centered area under curve
In atamalu/GCalcium: A Data Manipulation and Analysis Package for Calcium Indicator Data
Description
Usage
Arguments
Value
Examples
Description
'centered_AUC' computes the area under the curve (AUC) after centering values using a specified function, such as mean or min. Computed using trapezoidal integration.
Usage
1
centered_AUC(Dataframe, Trial, FUN = mean)
Arguments
Dataframe
a GCalcium-format data frame or matrix
Trial
a single trial number
FUN
a function to apply to each window
Value
Data frame of AUCs and curve number for each curve
Examples
1
2
3
# Get AUCs for trial 2, centered at the mean
df.new <- format_data(data = GCaMP)
centered_AUC(Dataframe = df.new, Trial = 2, FUN = mean)
atamalu/GCalcium documentation built on July 12, 2019, 7:04 p.m.
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Description Usage Arguments Value Examples
Description
'centered_AUC' computes the area under the curve (AUC) after centering values using a specified function, such as mean or min. Computed using trapezoidal integration.
Usage
1 | centered_AUC(Dataframe, Trial, FUN = mean)
|
Arguments
Dataframe |
a GCalcium-format data frame or matrix |
Trial |
a single trial number |
FUN |
a function to apply to each window |
Value
Data frame of AUCs and curve number for each curve
Examples
1 2 3 | # Get AUCs for trial 2, centered at the mean
df.new <- format_data(data = GCaMP)
centered_AUC(Dataframe = df.new, Trial = 2, FUN = mean)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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