allezC: Concatenate allez output

In atbroman/allez: Random-set calibration of gene-set statistics

Description

Concatenate output of allez into a list format; must be done with the same probe scores, used to combine GO and KEGG outputs together, before inputting into allezPlot.

Usage

allezC(...)

Arguments

...	2 or more list objects outputted from the allez function

Value

A list in the same format as allez output

Author(s)

Aimee Teo Broman

See Also

allez allezPlot

Examples

## Not run: 
data(npc)
scores  <- (1/2)*sqrt(28)*log((1-npc)/(1+npc))

## GO takes a long time ##
npc.go <- allez( scores=scores, lib="hgu133plus2", sets="GO")
npc.kegg <- allez( scores=scores, lib="hgu133plus2", sets="KEGG")

npc.all <- allezC(npc.go,npc.kegg)

## End(Not run)

atbroman/allez documentation built on May 10, 2019, 2:08 p.m.