Man pages for athrom/CytobankAPIstats
Computes Signaling and Population Stats for Cytometry Data on Cytobank using 'CytobankAPI'
| analyzedata | Returns a matrix of event counts or raw medians, as specified... |
| asinnorm | Computes the arcsinh ratio of a matrix in relation to the... |
| calcperevent | Calculates percentages of of cell types of interest out of... |
| CytobankAPIstatsGUI | Exports processed events and signaling data |
| filterfiles | Filters a list of fcs files by search terms |
| get1status | Filters matrix based on single sample name condition |
| get2status | Filters matrix columns based on two conditions per file, e.g.... |
| getfcsfiles | Gets fcs ID numbers and sample names from a given experiment |
| getmarkers | Gets appropriate marker IDs for channels of interest |
| getnewind | Rearranges signaling results matrix with rows in the desired... |
| getpops | Gets appropriate gate set IDs for populations of interest |
| getrawsignals | Computes the untransformed medians for cellular markers in... |
| parseevents | Modifies the list obtained from a call to statistics.events... |
| parsestats | Takes the results of a call to statistics.general and returns... |
| parsestatsmean | Takes the results of a call to statistics.general and returns... |
| percentevent | Calculates the percentage of cell populations given an... |
