pyt_analysis: pyt_analysis function

In austinjcase/BreedR: An R package for managing a breeding program

Description

This function allows to do pyt anlysis of aibd type designs within single years output is a tall file with the trait values from each location given as adjusted BLUES based on the checks. values of t0.05 are an LSD value for if they test line gives a "HIGHER" trait value than the selected line to beat where 1= higher than check at alpha 0.05. Where State is the overall average of all locations

Usage

pyt_analysis(exp_data = NULL, fld_data = NULL, qual_data = NULL,
  trls = NULL, yrs = NULL, trait = NULL, drop.locs = NULL,
  check.to.top = NULL)

Arguments

exp_data	REQUIRED data.frame experiemtn description file from OAT DATA BASE
fld_data	REQUIRED data.frame field phenotype file from OAT DATA BASE
qual_data	REQUIRED data.frame quality phenotype file from OAT DATA BASE
trls	REQUIRED vector type of trial as described by the OAT DATA BASE example "pyt"
trait	REQUIRED vector trait to be used example "yield"
drop.locs	OPTIONAL vector vector of trial_names to drop eample "c("pyt_2017_stp" , "pyt_2017_btn")"
check.to.top	REQUIRED vector check to test if signficantly better than example "DEON"

Examples

pyt_analysis

austinjcase/BreedR documentation built on May 16, 2019, 6:45 p.m.