vt_analysis: vt_analysis function

Description Usage Arguments Examples

Description

This function allows 1 2 and 3 yr data reprots like PR24

Usage

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vt_analysis(exp_data = NULL, fld_data = NUL, qual_data = NULL,
  trial_type = NULL, yr1 = NULL, yr2 = NULL, yr3 = NULL,
  trait_sel = NULL, exclude = NULL, expt_obj = NULL, cut_offs = NULL)

Arguments

exp_data

REQUIRED data.frame experiemtn description file from OAT DATA BASE

fld_data

REQUIRED data.frame field phenotype file from OAT DATA BASE

qual_data

REQUIRED data.frame quality phenotype file from OAT DATA BASE

yr1

REQUIRED vector first year of data to use example (2017) at least one value is required for yr1 or yr2

yr2

OPTIONAL vector first year of data to use example (2016) at least one value is required for yr1 or yr2

yr3

OPTIONAL vector first year of data to use example (2015)

trait_sel

REQUIRED vector exact name of trait to use in anlysis example "yield"

exclude

OPTIONAL list list of trial_names to exclude from the OAT DATA BASE example (c("vt_2017_stp", "vt_2016_stp"))

expt_obj

REQUIRED list list of experimnetal objectives as defined from the OAT DATA BASE example (""agro"")

cut_offs

OPTIONAL list list of critical values to drop of from trait data, where the first is the low and the second is the high example (c(50, 300) )

tyial_type

REQUIRED vector type of trial as described by the OAT DATA BASE example "vt"

Examples

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vt_analysis_2

austinjcase/BreedR documentation built on May 16, 2019, 6:45 p.m.