Man pages for avastermark19/doseR_0.99.4
doseR

cD.DMcD.DM Function to convert count dat object to LME4 input.
countDat-classAn S4 class that stores count data.
dafsdafs
dafsFilterdafsFilter Function to filter expression data within a cD...
extract-methodssubsetting method for countDat class
generateStatsgenerateStats Statistics function to summarize expression...
getLibsizes-methodsgetLibsizes method for count Dat class, derived from...
glSeqglSeq LME4 wrapper.
hmel.datHmel data set
iqrxFilteriqrxFilter Function to filter expression data within a...
libsizes-methodslibsizes method for testClass
make_RPKMmake_RPKM Make RPKM.
ncol-methodsreplicates method for testClass
nrow-methodsreplicates method for testClass
plotExprplotExpr Function to generate a boxplot (expression) for a...
plotMA.CDplotMA.CD Function to make MA plot.
plotRatioBoxesplotRatioBoxes Function to boxplot density of ratios between...
plotRatioDensityplotRatioDensity Function to plot density of ratios between...
quantFilterquantFilter Function to filter expression data of a countDat...
replicates-methodsreplicates method for testClass
rpkm-methodsrpkm method for testClass
simpleFiltersimpleFilter Function to filter expression data of a countDat...
test_diffstest_diffs Statistics function to summarize expression data...
avastermark19/doseR_0.99.4 documentation built on March 2, 2019, 12:23 a.m.