Man pages for averissimo/glmSparseNetPaper
| cv.glmSparseNet.mclapply | Calculate cross validating GLM model with network-based... |
| cv.glmSparseNet.mclapply-matrix-method | Calculate GLM model with network-based regularization |
| cv.glmSparseNet.mclapply-MultiAssayExperiment-method | Calculate GLM model with network-based regularization |
| cv.glmSparseNet.mclapply-SummarizedExperiment-method | Calculate GLM model with network-based regularization |
| fit.risk | Calculate c-index |
| glmSparseNet.cox | Call glmSparseNet model with Cox regression |
| glmSparseNet.cox_ | Call glmSparseNet model with Cox regression |
| km.name | Title |
| my.cv.glmnet | Title |
| my.draw.kaplan | Title |
| prepare.tcga.survival.data | Prepare FPKM data from TCGA project (specific tissue) |
| prepare.tcga.survival.data.old | Prepare FPKM data from TCGA project (specific tissue) |
| prettify.labels | Title |
| show.params | Title |
| test.all.clinical | Test all survival variables that are continuous or binary |
| update.survival.from.followup | Update clinical data from follow-up table |
