Files in azizka/CoordinateCleaner
Automated Cleaning of Occurrence Records from Biological Collections
.DS_Store
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.gitignore
CONTRIBUTING.md
CRAN-RELEASE
CoordinateCleaner.Rproj
DESCRIPTION
NAMESPACE
NEWS.md
R/CoordinateCleaner-package.R
R/cc_aohi.R
R/cc_cap.R
R/cc_cen.R
R/cc_coun.R
R/cc_dupl.R
R/cc_equ.R
R/cc_gbif.R
R/cc_inst.R
R/cc_iucn.R
R/cc_outl.R
R/cc_sea.R
R/cc_urb.R
R/cc_val.R
R/cc_zero.R
R/cd_ddmm.R
R/cd_round.R
R/cf_age.R
R/cf_equal.R
R/cf_outl.R
R/cf_range.R
R/clean_coordinates.R
R/clean_dataset.R
R/clean_fossils.R
R/internal_clean_coordinate.R
R/internal_clean_dataset.R
R/internal_write_pyrate.R
R/methods.spatialvalid.R
R/sysdata.rda
R/write_pyrate.R
README.md
_pkgdown.yml
_site.yml
articles/CoordinateCleaner.bib
articles/Dataset_level_cleaning.Rmd
articles/Geographic_outliers.Rmd
articles/The_institutions_database.Rmd
articles/The_institutions_database.html
articles/apa.csl
codemeta.json
cran-comments.md
data/aohi.rda
data/buffland.rda
data/buffsea.rda
data/countryref.rda
data/institutions.rda
data/pbdb_example.rda
docs/404.html
docs/CONTRIBUTING.html
docs/articles/Cleaning_GBIF_data_with_CoordinateCleaner.html
docs/articles/Cleaning_GBIF_data_with_CoordinateCleaner_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/Cleaning_GBIF_data_with_CoordinateCleaner_files/figure-html/unnamed-chunk-11-1.png
docs/articles/Cleaning_GBIF_data_with_CoordinateCleaner_files/figure-html/unnamed-chunk-16-1.png
docs/articles/Cleaning_GBIF_data_with_CoordinateCleaner_files/figure-html/unnamed-chunk-17-1.png
docs/articles/Cleaning_GBIF_data_with_CoordinateCleaner_files/figure-html/unnamed-chunk-18-1.png
docs/articles/Cleaning_GBIF_data_with_CoordinateCleaner_files/figure-html/unnamed-chunk-19-1.png
docs/articles/Cleaning_GBIF_data_with_CoordinateCleaner_files/figure-html/unnamed-chunk-5-1.png
docs/articles/Cleaning_GBIF_data_with_CoordinateCleaner_files/figure-html/unnamed-chunk-6-1.png
docs/articles/Cleaning_PBDB_fossils_with_CoordinateCleaner.html
docs/articles/Cleaning_PBDB_fossils_with_CoordinateCleaner_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/Cleaning_PBDB_fossils_with_CoordinateCleaner_files/figure-html/unnamed-chunk-16-1.png
docs/articles/Cleaning_PBDB_fossils_with_CoordinateCleaner_files/figure-html/unnamed-chunk-17-1.png
docs/articles/Cleaning_PBDB_fossils_with_CoordinateCleaner_files/figure-html/unnamed-chunk-25-1.png
docs/articles/Cleaning_PBDB_fossils_with_CoordinateCleaner_files/figure-html/unnamed-chunk-25-2.png
docs/articles/Cleaning_PBDB_fossils_with_CoordinateCleaner_files/figure-html/unnamed-chunk-27-1.png
docs/articles/Cleaning_PBDB_fossils_with_CoordinateCleaner_files/figure-html/unnamed-chunk-27-2.png
docs/articles/Cleaning_PBDB_fossils_with_CoordinateCleaner_files/figure-html/unnamed-chunk-7-1.png
docs/articles/Comparison_other_software.html
docs/articles/Comparison_other_software_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/Using_custom_gazetteers.html
docs/articles/Using_custom_gazetteers_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/Using_custom_gazetteers_files/figure-html/unnamed-chunk-1-1.png
docs/articles/Using_custom_gazetteers_files/figure-html/unnamed-chunk-2-1.png
docs/articles/Using_custom_gazetteers_files/figure-html/unnamed-chunk-2-2.png
docs/articles/clgbif11-1.png
docs/articles/clgbif16-1.png
docs/articles/clgbif17-1.png
docs/articles/clgbif18-1.png
docs/articles/clgbif19-1.png
docs/articles/clgbif5-1.png
docs/articles/clgbif6-1.png
docs/articles/cusgaz1-1.png
docs/articles/cusgaz2-1.png
docs/articles/cusgaz2-2.png
docs/articles/index.html
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/CoordinateCleaner-defunct.html
docs/reference/CoordinateCleaner-package.html
docs/reference/buffland.html
docs/reference/cc_cap.html
docs/reference/cc_cen.html
docs/reference/cc_coun.html
docs/reference/cc_dupl.html
docs/reference/cc_equ.html
docs/reference/cc_gbif.html
docs/reference/cc_inst.html
docs/reference/cc_iucn.html
docs/reference/cc_outl.html
docs/reference/cc_sea.html
docs/reference/cc_urb.html
docs/reference/cc_val.html
docs/reference/cc_zero.html
docs/reference/cd_ddmm.html
docs/reference/cd_round.html
docs/reference/cf_age.html
docs/reference/cf_equal.html
docs/reference/cf_outl.html
docs/reference/cf_range.html
docs/reference/clean_coordinates.html
docs/reference/clean_dataset.html
docs/reference/clean_fossils.html
docs/reference/countryref.html
docs/reference/index.html
docs/reference/institutions.html
docs/reference/pbdb_example.html
docs/reference/plot.spatialvalid-1.png
docs/reference/plot.spatialvalid.html
docs/reference/write_pyrate.html
index.Rmd
inst/CITATION
inst/WORDLIST
man/CoordinateCleaner-package.Rd
man/aohi.Rd
man/buffland.Rd
man/buffsea.Rd
man/cc_aohi.Rd
man/cc_cap.Rd
man/cc_cen.Rd
man/cc_coun.Rd
man/cc_dupl.Rd
man/cc_equ.Rd
man/cc_gbif.Rd
man/cc_inst.Rd
man/cc_iucn.Rd
man/cc_outl.Rd
man/cc_sea.Rd
man/cc_urb.Rd
man/cc_val.Rd
man/cc_zero.Rd
man/cd_ddmm.Rd
man/cd_round.Rd
man/cf_age.Rd
man/cf_equal.Rd
man/cf_outl.Rd
man/cf_range.Rd
man/clean_coordinates.Rd
man/clean_dataset.Rd
man/clean_fossils.Rd
man/countryref.Rd
man/institutions.Rd
man/is.spatialvalid.Rd
man/pbdb_example.Rd
man/plot.spatialvalid.Rd
man/write_pyrate.Rd
tests/testthat.R
tests/testthat/Rplots.pdf
tests/testthat/test_coordinatelevel_functions.R
tests/testthat/test_datasetlevel_functions.R
tests/testthat/test_fossillevel_functions.R
tests/testthat/test_wrapper_functions.R
vignettes/Cleaning_GBIF_data_with_CoordinateCleaner.R
vignettes/Cleaning_GBIF_data_with_CoordinateCleaner.Rmd
vignettes/Cleaning_GBIF_data_with_CoordinateCleaner.html
vignettes/Cleaning_GBIF_data_with_CoordinateCleaner_files/header-attrs-2.21/header-attrs.js
vignettes/Cleaning_PBDB_fossils_with_CoordinateCleaner.R
vignettes/Cleaning_PBDB_fossils_with_CoordinateCleaner.Rmd
vignettes/Cleaning_PBDB_fossils_with_CoordinateCleaner.html
vignettes/Comparison_other_software.Rmd
vignettes/Comparison_other_software.html
vignettes/CoordinateCleaner.bib
vignettes/Using_custom_gazetteers.R
vignettes/Using_custom_gazetteers.Rmd
vignettes/Using_custom_gazetteers.Rmd.orig
vignettes/Using_custom_gazetteers.html
vignettes/apa.csl
vignettes/cusgaz-cusgaz1-1.png
vignettes/cusgaz-cusgaz2-1.png
vignettes/cusgaz-cusgaz2-2.png
vignettes/gbif-clgbif11-1.png
vignettes/gbif-clgbif16-1.png
vignettes/gbif-clgbif17-1.png
vignettes/gbif-clgbif18-1.png
vignettes/gbif-clgbif19-1.png
vignettes/gbif-clgbif5-1.png
vignettes/gbif-clgbif6-1.png
vignettes/paleobioDB_angiosperms_PyRate.py
vignettes/paleobioDB_angiosperms_TaxonList.txt
vignettes/pbdb-unnamed-chunk-15-1.png
vignettes/pbdb-unnamed-chunk-16-1.png
vignettes/pbdb-unnamed-chunk-17-1.png
vignettes/pbdb-unnamed-chunk-24-1.png
vignettes/pbdb-unnamed-chunk-24-2.png
vignettes/pbdb-unnamed-chunk-25-1.png
vignettes/pbdb-unnamed-chunk-25-2.png
vignettes/pbdb-unnamed-chunk-26-1.png
vignettes/pbdb-unnamed-chunk-26-2.png
vignettes/pbdb-unnamed-chunk-27-1.png
vignettes/pbdb-unnamed-chunk-27-2.png
vignettes/pbdb-unnamed-chunk-33-1.png
vignettes/pbdb-unnamed-chunk-33-2.png
vignettes/pbdb-unnamed-chunk-35-1.png
vignettes/pbdb-unnamed-chunk-35-2.png
vignettes/pbdb-unnamed-chunk-7-1.png
