Man pages for b-steve/ascr
Acoustic spatial capture-recapture
| AIC.ascr | Extract AIC from an ascr model object |
| ascr | ascr: A package to fit acoustic spatial capture-recapture... |
| bearings | Calculating bearings between two sets of points |
| boot.ascr | Bootstrapping a fitted ascr model |
| coef.ascr | Extract ascr model coefficients |
| confint.ascr | Confidence intervals for ascr model parameters |
| convert.capt | Capture history conversion. |
| convert.mask | Convert mask object |
| convert.pamguard | Create a capture history object from a PAMGuard output file |
| convert.raven | Create a capture history object from a Raven output file |
| convert.traps | Convert traps object |
| create.capt | Creating capture history object. |
| create.mask | Create mask object |
| detfn | Calculating the detection function from a fitted model... |
| distances | Calculating distances between two sets of points |
| example.data | Example data |
| fit.ascr | Fitting acoustic SCR models |
| get.bias | Extracting estimated biases |
| get.capt | Extracting the capture histories |
| get.mask | Extracting mask point locations |
| get.mce | Extracting Monte Carlo error |
| get.par | Extract estimated or fixed parameter values from an 'ascr'... |
| get.traps | Extracting trap locations |
| lightfooti | _Arthroleptella lightfooti_ survey data |
| locations | Plotting estimated locations |
| make.acoustic.captures | Assigning ID numbers to sounds |
| mask.test | Testing the mask object for a first calls model |
| multi.example.data | Multi-array example data |
| par.fit.ascr | Parallelising ascr fits using a cluster |
| p.dot | Calculating detection probabilities |
| predict.ascr | Extract density estimates given a set of covariate values |
| secr_nll | Evaluating the likelihood using C++ |
| show.capt | Plotting capture histories |
| show.detfn | Plotting a detection function. |
| show.detsurf | Plotting the detection probability surface |
| show.Dsurf | Plotting an estimated density surface. |
| show.survey | Plotting mask and trap layout |
| sim.capt | Simulating SCR data |
| stdEr.ascr | Extract standard errors from an ascr model fit |
| stdEr.ascr.boot | Extract standard errors from a bootstrapped ascr model object |
| subsample.se | Combining subsamples to obtain a standard error. |
| summary.ascr | Summarising ascr model fits |
| test.ascr | Run ascr tests |
| vcov.ascr | Extract the variance-covariance matrix from an ascr model... |
| vcov.ascr.boot | Extract the variance-covariance matrix from a bootstrapped... |
