GRVtest: Revised implementation of GRV test for independence between...

In baolinwu/MiRV: Kernel based independence test for microbiome association studies

Description

Revised implementation of GRV test for independence between paired data

Usage

GRVtest(GX, GY, Gower = FALSE)

Arguments

GX	distance matrix or the computed Gower matrix for a set of outcomes
GY	distance matrix or the computed Gower matrix for another set of outcomes
kernel	indicator of whether the input is Gower matrix computed using D2Gs().

Value

test statistic and its p-value

References

Minas, C., Curry, E., Montana, G., 2013. A distance-based test of association between paired heterogeneous genomic data. Bioinformatics 29, 2555<e2><80><93>2563.

Guo,B. and Wu,B. (2017) On the fast small-sample kernel independence test for microbiome community-level association analysis. Biometrics, doi:10.1111/biom.12823.

baolinwu/MiRV documentation built on May 28, 2019, 6:37 p.m.