phgropro: phgropro: Tidying kinetic od600 and pH data from biotek plate...
In baynec2/phgrofit: Extracting Physiological Data From Kinetic OD600 and pH Curves
phgropro R Documentation
phgropro: Tidying kinetic od600 and pH data from biotek plate reader.
Copyright (c) 2019. Kaleido Biosciences. All Rights Reserved
Description
phgropro- pH growh processing- takes the export from a standardized biotek plate reader and converts it into a tidy format that is convenient for data analysis. This tidy format will oftern serve as the input to phgrofit.
Usage
phgropro(biotek_export, metadata, Plate_Type = 96)
Arguments
biotek_export
.txt file that results from a specific format of exporting data from the Biotek Gen5 software.
metadata
.csv file that contains information about the contents of the samples. Must contain a column called Sample.ID.
Plate_Type
96 or 384 specifying which plate type was ran on the plate reader.
Value
tidy data frame with a column for Sample ID, any metadata columns present,Time, OD600, and pH.
baynec2/phgrofit documentation built on March 24, 2024, 7:10 a.m.
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| phgropro | R Documentation |
phgropro: Tidying kinetic od600 and pH data from biotek plate reader. Copyright (c) 2019. Kaleido Biosciences. All Rights Reserved
Description
phgropro- pH growh processing- takes the export from a standardized biotek plate reader and converts it into a tidy format that is convenient for data analysis. This tidy format will oftern serve as the input to phgrofit.
Usage
phgropro(biotek_export, metadata, Plate_Type = 96)
Arguments
biotek_export |
.txt file that results from a specific format of exporting data from the Biotek Gen5 software. |
metadata |
.csv file that contains information about the contents of the samples. Must contain a column called Sample.ID. |
Plate_Type |
96 or 384 specifying which plate type was ran on the plate reader. |
Value
tidy data frame with a column for Sample ID, any metadata columns present,Time, OD600, and pH.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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