API for bbuchsbaum/neuroca
neuroca: multiblock component analysis for neuroimaging data
| Global functions | |
|---|---|
| .center_scale | Source code |
| .combinedAUC | Source code |
| .msqrt | Source code |
| .uncenter_scale | Source code |
| SURE_cost | Source code |
| add_node | Man page Source code |
| add_node.prepper | Source code |
| apply_scaling | Source code Source code |
| as.list.block_matrix | Source code |
| as.list.block_matrix_list | Source code |
| as.list.super_block_matrix | Source code |
| as.matrix.block_matrix_list | Source code |
| as.matrix.block_projector | Source code |
| as.matrix.super_block_matrix | Source code |
| asca_subset | Source code |
| avg_probs | Source code |
| bada | Man page Source code |
| bi_projector | Man page Source code |
| block_apply | Man page Source code |
| block_apply.block_matrix | Source code |
| block_apply.super_block_matrix | Source code |
| block_index_list | Man page Source code |
| block_index_list.block_matrix | Source code |
| block_index_list.mfa | Source code |
| block_index_list.multiblock | Source code |
| block_index_list.sca | Source code |
| block_index_list.super_block_matrix | Source code |
| block_indices | Source code |
| block_lengths | Man page Source code |
| block_lengths.block_matrix | Source code |
| block_lengths.super_block_matrix | Source code |
| block_matrix | Man page Source code |
| block_matrix_list | Man page Source code |
| block_pca | Man page Source code |
| block_project | Man page Source code |
| block_project.metapca | Source code |
| block_project.mfa | Source code |
| block_project.multiblock_da | Source code |
| block_projector | Man page Source code |
| boot_ratio | Man page Source code |
| boot_sd | Man page Source code |
| boot_sum | Source code |
| boot_svd | Source code |
| bootstrap | Man page Source code |
| bootstrap.bada | Source code |
| bootstrap.mubada | Man page Source code |
| bootstrap.musu_asca | Source code |
| bootstrap.pca | Source code |
| canautocor | Source code |
| center | Source code |
| centering_matrix | Source code |
| classifier | Man page Source code |
| classifier.projector | Source code |
| code_replications | Source code Source code |
| colCors | Source code |
| collapse | Man page Source code |
| colscale | Source code |
| combine | Source code |
| combine.projector | Source code |
| combinedACC | Source code Source code |
| combinedAUC | Source code Source code |
| compose | Source code |
| compose.block_projector | Source code |
| compose.projector | Source code |
| compose_all | Source code |
| compute_sim_mat | Source code |
| concat | Source code |
| construct_design_table | Source code |
| contributions | Man page Source code |
| contributions.bi_projector | Source code |
| contributions.genpca | Source code |
| contributions.mfa | Source code |
| contributions.multiblock | Source code |
| contributions.multiblock_da | Source code |
| contributions.projector | Source code |
| corMat | Source code |
| correlations | Source code |
| cross_validate | Man page Source code |
| diagonal | Source code |
| dim.block_matrix_list | Source code |
| dim.block_projector | Source code |
| dim.composed_projector | Source code |
| dim.projector | Source code |
| dim.super_block_matrix | Source code |
| dim_reduce | Man page Source code |
| do_permutation | Source code |
| explor.pca | Source code |
| fast_estim_ncomp | Man page Source code |
| feature_weighted_spatial_constraints | Source code |
| fresh | Man page Source code |
| fresh.pre_processor | Source code |
| fresh.prepper | Source code |
| gen_basis | Source code |
| gen_threeway_mat | Source code |
| genpca | Man page Source code |
| genreconstruct | Source code |
| genreprocess | Source code |
| get_block | Man page |
| get_block.block_matrix | Source code |
| get_block.block_matrix_list | Source code |
| get_block.block_projector | Source code |
| get_block.super_block_matrix | Source code |
| get_block_indices | Source code |
| get_perm | Source code |
| gmdLA | Source code |
| gmdLA_cpp | Source code |
| gmd_deflationR | Source code |
| gmd_deflation_cpp | Source code |
| group_means | Man page Source code Source code |
| hpca | Man page Source code |
| impute_mfa | Source code |
| is.block_matrix | Source code |
| laplacian_scores | Source code |
| loadings | Man page Source code |
| loadings.bada | Source code |
| loadings.bi_projector | Source code |
| loadings.canautocor | Source code |
| loadings.composed_projector | Source code |
| loadings.genpca | Source code |
| loadings.metapca | Source code |
| loadings.mfa | Source code |
| loadings.multiblock | Source code |
| loadings.multiblock_da | Source code |
| loadings.musu_asca | Source code |
| loadings.projector | Source code |
| loadings.sca | Source code |
| matrix_to_block_matrix | Source code |
| metapca | Man page Source code |
| mfa | Man page Source code |
| muasca | Man page Source code |
| mubada | Man page Source code |
| multiscale_pca | Source code |
| names.block_matrix | Source code Source code |
| nblocks | Man page Source code |
| nblocks.block_matrix | Source code |
| nblocks.multiblock | Source code |
| nblocks.super_block_matrix | Source code |
| ncol.block_matrix_list | Source code |
| ncol.block_projector | Source code |
| ncol.composed_projector | Source code |
| ncol.multiblock | Source code |
| ncol.projector | Source code |
| ncol.sca | Source code |
| ncol.super_block_matrix | Source code |
| ncomp | Man page Source code |
| ncomp.block_projector | Source code |
| ncomp.composed_projector | Source code |
| ncomp.mfa | Source code |
| ncomp.mubada | Source code |
| ncomp.multiblock | Source code |
| ncomp.projector | Source code |
| ncomp.sca | Source code |
| nearest_class | Source code |
| nested_cv | Source code |
| neuroca | Man page |
| normalization_factors | Source code |
| normalize | Source code Source code |
| normalize_probs | Source code |
| nrow.bi_projector | Source code |
| nrow.block_matrix_list | Source code |
| nrow.block_projector | Source code |
| nrow.composed_projector | Source code |
| nrow.multiblock | Source code |
| nrow.sca | Source code |
| nrow.super_block_matrix | Source code |
| partial_project | Man page Source code |
| partial_projector | Man page Source code |
| partial_scores | Man page Source code |
| partial_scores.mfa | Source code |
| partial_scores.multiblock | Source code |
| pass | Source code |
| pca | Man page Source code |
| pca_gca | Source code |
| performance | Source code |
| performance.multiblock_da | Source code |
| performance.musu_asca | Source code |
| permutation | Source code |
| permutation.bada | Source code |
| permutation.mfa | Source code |
| permutation.mubada | Source code |
| permutation.musu_asca | Source code |
| permutation.pca | Source code |
| permutation.sca | Source code |
| permute | Source code |
| permute.bada | Source code |
| permute_refit | Source code |
| permute_refit.multiblock_da | Source code |
| pre_process | Source code |
| pre_processor | Source code |
| predict.bada | Source code |
| predict.classifier | Source code |
| predict.genpca | Source code |
| predict.mfa | Source code |
| predict.multiblock | Source code |
| predict.multiblock_da | Source code |
| predict.musu_asca | Source code |
| predict.procrusteanized_da | Source code |
| prep | Man page Source code |
| prep.prepper | Source code |
| prep_constraints | Source code |
| prep_multiblock_da | Source code |
| prep_node | Source code |
| prepare_results.pca | Source code |
| prepper | Man page Source code |
| print.bada | Source code |
| print.bi_projector | Source code |
| print.block_matrix | Source code |
| print.block_projector | Source code |
| print.mubada | Source code |
| print.prepper | Source code |
| print.super_block_matrix | Source code |
| proc_rot | Man page Source code |
| procrusteanize | Source code |
| procrusteanize.mfa | Source code |
| procrusteanize.multiblock_da | Source code |
| project | Man page Source code |
| project.bada | Source code |
| project.block_projector | Source code |
| project.composed_projector | Source code |
| project.genpca | Source code |
| project.metapca | Source code |
| project.mfa | Source code |
| project.multiblock | Source code |
| project.multiblock_da | Source code |
| project.projector | Source code |
| project.regress | Source code |
| project.svd | Source code |
| project_cols | Man page Source code |
| project_cols.bada | Source code |
| project_cols.bi_projector | Source code |
| project_cols.genpca | Source code |
| project_cols.mfa | Source code |
| project_cols.multiblock_da | Source code |
| project_copy | Source code |
| project_table | Man page Source code |
| project_xav | Source code |
| projection_fun | Man page Source code |
| projection_fun.bi_projector | Source code |
| projection_fun.block_projector | Source code |
| projection_fun.mfa | Source code |
| projector | Man page Source code |
| pseudo_svd | Man page Source code |
| rank_score | Source code |
| rbind.block_matrix | Source code |
| reconstruct | Man page Source code |
| reconstruct.bada | Source code |
| reconstruct.bi_projector | Source code |
| reconstruct.composed_projector | Source code |
| reconstruct.genpca | Source code |
| reconstruct.metapca | Source code |
| reconstruct.mfa | Source code |
| reconstruct.multiblock_da | Source code |
| reconstruct.regress | Source code |
| reconstruct.sca | Source code |
| reduce_rows | Source code |
| refit | Source code |
| refit.bada | Source code |
| refit.mubada | Source code |
| refit.pca | Source code |
| refit.scada | Source code |
| regress | Source code |
| relief_scores | Source code |
| reprocess | Source code |
| reprocess.bada | Source code |
| reprocess.bi_projector | Man page Source code |
| reprocess.multiblock | Source code |
| reprocess.multiblock_da | Source code |
| reprocess.projector | Source code |
| reproducibility | Man page Source code |
| reproducibility.multiblock_da | Source code |
| resample | Man page Source code |
| resample.bada | Source code |
| resample.mubada | Source code |
| resampleXY | Source code |
| residualize | Man page Source code |
| residuals | Man page Source code |
| residuals.bada | Source code |
| residuals.bi_projector | Source code |
| residuals.pca | Source code |
| residuals.regress | Source code |
| reverse_pre_process | Source code |
| rfsa | Source code |
| rotate | Man page Source code |
| rotate.bada | Source code |
| rotate.pca | Source code |
| sca | Source code |
| scada | Man page Source code |
| scorepred | Man page Source code |
| scores | Man page Source code |
| scores.bada | Source code |
| scores.bi_projector | Source code |
| scores.block_projector | Source code |
| scores.canautocor | Source code |
| scores.composed_projector | Source code |
| scores.mfa | Source code |
| scores.multiblock | Source code |
| scores.multiblock_da | Source code |
| scores.musu_asca | Source code |
| scores.regress | Source code |
| scores.sca | Source code |
| sgmd_deflation_cpp | Source code |
| shrink.pca | Source code |
| shrink_pca | Man page Source code |
| singular_values | Source code |
| singular_values.bada | Source code |
| singular_values.bi_projector | Source code |
| singular_values.genpca | Source code |
| singular_values.mfa | Source code |
| singular_values.multiblock_da | Source code |
| singular_values.sca | Source code |
| spatial_constraints | Man page Source code |
| split_matrix | Source code |
| standardize | Source code |
| subset_rows | Source code |
| subset_rows.multiblock_da | Source code |
| summarize_loadings | Source code |
| summarize_loadings.multiblock | Source code |
| super_block_matrix | Source code |
| supplementary_loadings | Source code |
| supplementary_loadings.metapca | Source code |
| supplementary_loadings.mubada | Source code |
| supplementary_predictor | Source code |
| svd_dutp | Source code |
| svd_wrapper | Man page Source code |
| to_block_matrix | Source code |
| trace_ratio | Man page Source code |
| truncate | Source code |
| truncate.bi_projector | Source code |
| truncate.genpca | Source code |
| unit_norm | Source code |
| vaf | Source code |
| vfa.mfa | Source code |
