Files in bbuchsbaum/neuroim

Data Structures and Handling for Neuroimaging Data

R/AFNI_IO.R R/AllClass.R R/AllGeneric.R R/Axis.R R/BasisBrainVector.R R/BinaryIO.R R/BrainBucket.R R/BrainData.R R/BrainFileDescriptor.R R/BrainMetaInfo.R R/BrainRegion3D.R R/BrainSlice.R R/BrainSpace.R R/BrainVector.R R/BrainVolume.R R/Display.R R/IndexLookupVolume.R R/NIFTI_IO.R R/Ops.R R/RcppExports.R R/Searchlight.R R/SparseBrainVector.R R/common.R R/conncomp.R R/datadoc.R R/neuroim.R R/niml_io.R README.md inst/tests/test-indices.R man/AFNIFileDescriptor-class.Rd man/AFNIMetaInfo-class.Rd man/AxisSet-class.Rd man/AxisSet1D-class.Rd man/AxisSet2D-class.Rd man/AxisSet3D-class.Rd man/AxisSet4D-class.Rd man/AxisSet5D-class.Rd man/Base-class.Rd man/BaseMetaInfo-class.Rd man/BaseSource-class.Rd man/BinaryReader-class.Rd man/BinaryReader.Rd man/BinaryWriter-class.Rd man/BootstrapSearchlight.Rd man/BrainBasisVector.Rd man/BrainBucket-class.Rd man/BrainBucketSource-class.Rd man/BrainData-class.Rd man/BrainFileDescriptor-class.Rd man/BrainFileSource-class.Rd man/BrainMetaInfo-class.Rd man/BrainSlice-class.Rd man/BrainSlice.Rd man/BrainSource-class.Rd man/BrainSpace-class.Rd man/BrainSpace.Rd man/BrainVector-class.Rd man/BrainVector-methods.Rd man/BrainVectorSource-class.Rd man/BrainVectorSource.Rd man/BrainVolume-class.Rd man/BrainVolume.Rd man/BrainVolumeSource-class.Rd man/ClusteredBrainVolume-class.Rd man/ClusteredSearchlight.Rd man/ColumnReader-class.Rd man/ColumnReader.Rd man/DenseBrainVector-class.Rd man/DenseBrainVolume-class.Rd man/FileMetaInfo-class.Rd man/IndexLookupVolume-class.Rd man/Kernel-class.Rd man/Kernel.Rd man/LogicalBrainVolume-class.Rd man/MNI_SPACE_1MM.Rd man/NIfTIFileDescriptor-class.Rd man/NIfTIMetaInfo-class.Rd man/NamedAxis-class.Rd man/NullMetaInfo-class.Rd man/ROI-class.Rd man/ROIVector-class.Rd man/ROIVector.Rd man/ROIVolume-class.Rd man/ROIVolume.Rd man/RandomSearchlight.Rd man/RegionCube.Rd man/RegionSphere.Rd man/RegionSquare.Rd man/Searchlight.Rd man/SparseBrainVector-class.Rd man/SparseBrainVectorSource-class.Rd man/SparseBrainVolume-class.Rd man/addDim-methods.Rd man/as-methods.Rd man/as.array-BrainData-method.Rd man/as.list-methods.Rd man/as.logical-methods.Rd man/as.mask-methods.Rd man/as.matrix-BrainData-method.Rd man/as.matrix-methods.Rd man/as.numeric-methods.Rd man/as.sparse-methods.Rd man/as.vector-BrainData-method.Rd man/axes-methods.Rd man/axisToIndex-methods.Rd man/bounds-methods.Rd man/close-methods.Rd man/concat-methods.Rd man/connComp-methods.Rd man/connComp3D.Rd man/coordToGrid-methods.Rd man/coordToIndex-methods.Rd man/coords-methods.Rd man/dataFile-methods.Rd man/dataFileMatches-methods.Rd man/dataReader-methods.Rd man/dim-BrainData-method.Rd man/dim-BrainSpace-method.Rd man/dim-FileMetaInfo-method.Rd man/dropDim-methods.Rd man/eachSeries-methods.Rd man/eachSlice-methods.Rd man/eachVolume-methods.Rd man/fileMatches-methods.Rd man/fill-methods.Rd man/gridToCoord-methods.Rd man/gridToGrid-methods.Rd man/gridToIndex-methods.Rd man/headerFile-methods.Rd man/headerFileMatches-methods.Rd man/image-methods.Rd man/indexToCoord-methods.Rd man/indexToGrid-methods.Rd man/indices-methods.Rd man/internal-methods.Rd man/inverseTrans-methods.Rd man/length-methods.Rd man/loadBucket.Rd man/loadData-methods.Rd man/loadVector.Rd man/loadVolume.Rd man/loadVolumeList.Rd man/lookup-methods.Rd man/makeVector.Rd man/makeVolume.Rd man/map-methods.Rd man/mapToColors.Rd man/matchAnatomy2D.Rd man/matchAnatomy3D.Rd man/matrixToVolumeList.Rd man/names-methods.Rd man/ndim-methods.Rd man/neuroim.Rd man/numClusters-methods.Rd man/origin-methods.Rd man/overlay-methods.Rd man/patchSet.Rd man/permMat-methods.Rd man/print-AxisSet2D-method.Rd man/print-AxisSet3D-method.Rd man/print-NamedAxis-method.Rd man/print-methods.Rd man/readAFNIHeader.Rd man/readColumns-methods.Rd man/readElements-methods.Rd man/readHeader.Rd man/readMetaInfo-methods.Rd man/render-methods.Rd man/renderSlice-methods.Rd man/reorient-methods.Rd man/scaleSeries-methods.Rd man/series-methods.Rd man/seriesIter.Rd man/show-AxisSet1D-method.Rd man/show-AxisSet2D-method.Rd man/show-AxisSet3D-method.Rd man/show-AxisSet4D-method.Rd man/show-BaseMetaInfo-method.Rd man/show-BrainSpace-method.Rd man/show-BrainVector-method.Rd man/show-BrainVectorSource-method.Rd man/show-BrainVolume-method.Rd man/show-FileMetaInfo-method.Rd man/show-NamedAxis-method.Rd man/show-NullMetaInfo-method.Rd man/show-ROIVolume-method.Rd man/show-SparseBrainVector-method.Rd man/slice-methods.Rd man/sliceData.Rd man/space-methods.Rd man/spacing-methods.Rd man/splitFill-methods.Rd man/splitReduce-methods.Rd man/splitScale-methods.Rd man/stripExtension-methods.Rd man/sub-BrainBucket-index-missing-ANY-method.Rd man/sub-SparseBrainVector-missing-missing-ANY-method.Rd man/sub-SparseBrainVector-missing-numeric-ANY-method.Rd man/sub-SparseBrainVector-numeric-missing-ANY-method.Rd man/sub-SparseBrainVector-numeric-numeric-ANY-method.Rd man/sub-SparseBrainVolume-matrix-missing-ANY-method.Rd man/sub-SparseBrainVolume-missing-missing-ANY-method.Rd man/sub-SparseBrainVolume-missing-numeric-ANY-method.Rd man/sub-SparseBrainVolume-numeric-missing-missing-method.Rd man/sub-SparseBrainVolume-numeric-numeric-ANY-method.Rd man/sub-sub-BrainBucket-index-missing-method.Rd man/subVector-methods.Rd man/takeVolume-methods.Rd man/trans-methods.Rd man/values-methods.Rd man/vol_subset-methods.Rd man/voxels-methods.Rd man/writeElements-methods.Rd man/writeVector-methods.Rd man/writeVolume-methods.Rd run_unit.R tests/runit-BrainBucket.R tests/runit-BrainMetaInfo.R tests/runit-BrainVector.R tests/runit-BrainVolume.R tests/runit-connComp3D.R tests/runit-filtertest.R tests/test-all.R tests/testthat/test-roivolume.R vignettes/FileIO.R vignettes/FileIO.Rmd vignettes/neuroim.Rmd vignettes/neuroim.md vignettes/regionOfInterest.Rmd vignettes/regionOfInterest.md