Man pages for bbuchsbaum/neurosurf
Data structures and visualization for surface-based neuroimaging data
| adjacency-methods | Get Adjacency Graph |
| AFNISurfaceFileDescriptor-class | AFNISurfaceFileDescriptor |
| Arith-methods | Arithmetic Operations for NeuroSurface Objects |
| as.matrix-methods | as.matrix |
| as-methods | as |
| as.vector-methods | as.vector |
| BilatNeuroSurfaceVector-class | Bilateral NeuroSurface Vector Class |
| cluster_threshold-methods | Apply Cluster-Extent Threshold to Surface Data |
| ColorMappedNeuroSurface | ColorMappedNeuroSurface |
| ColorMappedNeuroSurface-class | ColorMappedNeuroSurface |
| Compare-methods | Comparison Operations for NeuroSurface Objects |
| conn_comp-methods | Compute Connected Components on a Surface |
| coords-methods | coords |
| curvature-methods | Compute Surface Curvature Vector |
| curv_cols | Convert Curvature Values to Binary Colors for Visualization |
| data_reader-methods | data_reader |
| find_all_neighbors | Find Node Neighbors in a Surface Mesh |
| findBoundaries-methods | Find Boundaries Between Regions on a Surface |
| find_roi_boundaries | Find Boundaries of ROIs Defined on a Surface |
| FreesurferAsciiSurfaceFileDescriptor-class | FresurferAsciiSurfaceFileDescriptor |
| FreesurferBinarySurfaceFileDescriptor-class | FresurferBinarySurfaceFileDescriptor |
| FreeSurferSurfaceGeometryMetaInfo-class | FreesurferSurfaceGeometryMetaInfo Class |
| geometry-methods | Extract Geometry from Surface Object |
| GIFTISurfaceDataMetaInfo-class | GIFTISurfaceDataMetaInfo |
| GIFTISurfaceFileDescriptor-class | GIFTISurfaceFileDescriptor |
| GIFTISurfaceGeometryMetaInfo-class | GIFTISurfaceGeometryMetaInfo |
| graph-methods | extract 'igraph' object |
| indices-methods | indices |
| LabeledNeuroSurface-class | LabeledNeuroSurface Class |
| laplacian-methods | Compute Graph Laplacian |
| left-methods | Get Left Hemisphere |
| length-methods | length |
| load_data-methods | load_data |
| loadFSSurface | load Freesurfer ascii surface |
| meshToGraph | Construct a Graph from Mesh Vertices and Faces |
| neighbor_graph-methods | Construct Neighborhood Graph from Surface Mesh |
| neurosurf | neurosurf: Data structures and IO for surface-based... |
| NeuroSurface | Construct a NeuroSurface Object |
| NeuroSurface-class | NeuroSurface |
| NeuroSurfaceSource-class | NeuroSurfaceSource Class |
| NeuroSurfaceVector | NeuroSurfaceVector |
| NeuroSurfaceVector-class | NeuroSurfaceVector Class |
| NeuroSurfaceVectorSource-class | NeuroSurfaceVectorSource |
| NIMLSurfaceDataMetaInfo-class | NIMLSurfaceDataMetaInfo |
| NIMLSurfaceFileDescriptor-class | NIMLSurfaceFileDescriptor |
| nodes-methods | Extract Surface Node Numbers |
| plot_js-methods | Plot Surface as an HTMLWidget |
| plot-methods | plot a surface |
| print.Searchlight | Print Method for Searchlight Iterator |
| projectCoordinates | Project 3D Coordinates onto a Surface and Smooth the Values |
| RandomSurfaceSearchlight | Create a Random Searchlight iterator for surface mesh |
| read_freesurfer_annot | Read Freesurfer Annotation File |
| read_meta_info | read_meta_info |
| read_meta_info-methods | Generic function to read image meta info given a file and a... |
| read_surf | Read Surface Data from a File |
| read_surf_data | load surface data and link to 'SurfaceGeometry' |
| read_surf_data_seq | read_surf_data_seq |
| read_surf_geometry | Read Surface Geometry from File |
| remeshSurface | Remesh a SurfaceGeometry object |
| right-methods | Get Right Hemisphere |
| ROISurface | Create an instance of class 'ROISurface' |
| ROISurface-class | ROISurface |
| ROISurfaceVector | Create an instance of class 'ROISurfaceVector' |
| ROISurfaceVector-class | ROISurfaceVector |
| series-methods | series |
| series_roi-methods | series_roi |
| show-methods | show |
| smooth-methods | Generic Function for Smoothing a Surface or Associated Data |
| smooth-NeuroSurface-method | Smooth Data on a NeuroSurface Object |
| sub-NeuroSurfaceVector-missing-missing-ANY-method | extractor |
| sub-NeuroSurfaceVector-missing-numeric-ANY-method | extractor |
| sub-NeuroSurfaceVector-numeric-missing-ANY-method | extractor |
| sub-NeuroSurfaceVector-numeric-numeric-ANY-method | extractor |
| sub-ROISurface | Subset an ROISurface Object |
| sub-sub-NeuroSurfaceVector-numeric-method | extractor |
| SurfaceDataMetaInfo-class | SurfaceDataMetaInfo |
| SurfaceDisk | Create a Region on Surface |
| SurfaceGeometry | Create a SurfaceGeometry Object |
| SurfaceGeometry-class | SurfaceGeometry Class |
| SurfaceGeometryMetaInfo-class | SurfaceGeometryMetaInfo Class |
| SurfaceGeometrySource-class | SurfaceGeometrySource Class |
| SurfaceSearchlight | SurfaceSearchlight |
| surfwidget-methods | Create a Surface Widget |
| surfwidget-shiny | Shiny bindings for surfwidget |
| surfwidget-SurfaceGeometry-method | surfwidget |
| updateAlpha | Update Surface Opacity |
| updateColorMap | Update Surface Color Map |
| updateIRange | Update Data Intensity Range |
| updateSurfwidgetConfig | Update Surfwidget Configuration |
| updateThreshold | Update Display Threshold |
| updateVertexColors | Update Vertex Colors |
| values-methods | values |
| VertexColoredNeuroSurface-class | VertexColoredNeuroSurface |
| VertexData-class | VertexData |
| vertices-methods | Extract Vertices from a Surface Object |
| view_surface | Display a 3D Brain Surface using RGL |
| vol_to_surf | Map values from a 3D volume to a surface in the same... |
| write_surf_data | Write Surface Data to File |
