Man pages for bbuchsbaum/neurosurf
Data structures and IO for surface-based neuroimaging data

adjacency-methodsadjacency
AFNISurfaceDataMetaInfoConstructor for 'AFNISurfaceDataMetaInfo' class
AFNISurfaceFileDescriptor-classAFNISurfaceFileDescriptor
as.matrix-methodsconvert a 'ROISurfaceVector' to an augmented matrix
as-methodsconvert from 'NeuroSurface' to 'vector'
as.vector-NeuroSurface-methodconvert 'NeuroSurface' instance to vector
BilatNeuroSurfaceVector-classBilatNeuroSurfaceVector
conn_comp-methodsconnected components on a surface
coords-methodsindices
curvaturecurvature
curvature-methodscurvature
curv_colsconvert curvature vector to a set of binary colors
data_reader-methodsreturn a reader function
FreesurferAsciiSurfaceFileDescriptor-classFresurferAsciiSurfaceFileDescriptor
FreesurferSurfaceGeometryMetaInfoConstructor for 'SurfaceGeometryMetaInfo' class
FreeSurferSurfaceGeometryMetaInfo-classFreeSurferSurfaceGeometryMetaInfo
geometry-methodsextract geometry object
graph-methodsextract 'igraph' object
helloHello, World!
indices-methodsindices
laplacian-methodslaplacian
leftleft
left-methodsleft
length-methodsindices
load_data-methodsload a NeuroSurfaceVector
loadFSSurfaceload Freesurfer ascii surface
map_values-methodsmap data using a lookup table
meshToGraphconstruct a graph from a set of vertices and nodes faces.
neighbor_graph-methodsGeneric function to construct neighborhood graph from surface...
neurosurfneurosurf
NeuroSurfaceNeuroSurface
NeuroSurface-classNeuroSurface
NeuroSurfaceSource-classNeuroSurfaceSource
NeuroSurfaceVectorNeuroSurfaceVector
NeuroSurfaceVector-classNeuroSurfaceVector
NeuroSurfaceVectorSource-classNeuroSurfaceVectorSource
NIMLSurfaceDataMetaInfoConstructor for 'NIMLSurfaceDataMetaInfo' class
NIMLSurfaceDataMetaInfo-classNIMLSurfaceDataMetaInfo
NIMLSurfaceFileDescriptor-classNIMLSurfaceFileDescriptor
nodes-methodsextract surface node numbers
plot-methodsplot an image
RandomSurfaceSearchlightCreate a Random Searchlight iterator for surface mesh using...
readAFNISurfaceHeaderreadAFNISurfaceHeader
readFreesurferAsciiGeometryreadFreesurferAsciiGeometry
readFreesurferAsciiHeaderreadFreesurferAsciiHeader
read_meta_info-methodsGeneric function to read image meta info given a file and a...
readNIMLSurfaceHeaderreadNIMLSurfaceHeader
read_surfread a surface data set
read_surf_dataload surface data and attach to 'SurfaceGeometry'
read_surf_data_seqread_surf_data_seq
read_surf_geometryread_surf_geometry
rightright
ROISurfaceCreate an instance of class 'ROISurface'
ROISurface-classROISurface
ROISurfaceVectorCreate an instance of class 'ROISurfaceVector'
ROISurfaceVector-classROISurfaceVector
series-methodsseries
show-NeuroSurface-methodshow a 'NeuroSurface'
show-NeuroSurfaceVector-methodshow a 'NeuroSurfaceVector'
show-ROISurface-methodshow an 'ROISurface'
show-SurfaceDataMetaInfo-methodshow an 'SurfaceDataMetaInfo'
show-SurfaceGeometryMetaInfo-methodshow an 'SurfaceGeometryMetaInfo'
show-SurfaceGeometry-methodshow a 'SurfaceGeometry'
smooth-methodssmooth a surface
sub-NeuroSurfaceVector-missing-missing-ANY-methodextractor
sub-NeuroSurfaceVector-missing-numeric-ANY-methodextractor
sub-NeuroSurfaceVector-numeric-missing-ANY-methodextractor
sub-NeuroSurfaceVector-numeric-numeric-ANY-methodextractor
SurfaceDataMetaInfoConstructor for 'SurfaceDataMetaInfo' class
SurfaceDataMetaInfo-classSurfaceDataMetaInfo
SurfaceDiskCreate a Region on Surface
SurfaceGeometry-classSurfaceGeometry
SurfaceGeometryMetaInfo-classSurfaceGeometryMetaInfo
SurfaceGeometrySource-classSurfaceGeometrySource
SurfaceSearchlightSurfaceSearchlight
surf_subset-methodssubset an 'ROISurface'
values-methodsvalues
vertices-methodsextract vertices from surface
write_surf_datawrite_surf_data
bbuchsbaum/neurosurf documentation built on Oct. 15, 2018, 1:21 a.m.