England_BA: Ancient human DNA samples from David Reich's lab
In bcm-uga/tfa: Factor Analysis of Temporal Population Genetic Samples
Description
Usage
Format
Source
Description
A dataset containing 10,000 filtered SNP genotypes from 118 samples, from Neolithic and Bronze Age Great Britain,
Steppe (Yamnaya), early farmers from Anatolia, and hunter-gatherers from Serbia. Metadata and sample
ages are also provided.
Usage
1
Format
List with 3 objects
- age
a numeric vector containing the sample ages, where age is measured in year cal BP
- genotype
a numeric matrix containing diploid genotypes (0,1,2) for 118 ancient Eurasians. The 10,000 filtered SNPs were randomly selected from a large set of variants. The matrix contains no missing genotypes.
- meta
metadata on individuals: Instance.ID, Group.ID, Country of origin and coverage
Source
https://reich.hms.harvard.edu/datasets
bcm-uga/tfa documentation built on Aug. 28, 2020, 2:46 p.m.
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Description Usage Format Source
Description
A dataset containing 10,000 filtered SNP genotypes from 118 samples, from Neolithic and Bronze Age Great Britain, Steppe (Yamnaya), early farmers from Anatolia, and hunter-gatherers from Serbia. Metadata and sample ages are also provided.
Usage
1 |
Format
List with 3 objects
- age
a numeric vector containing the sample ages, where age is measured in year cal BP
- genotype
a numeric matrix containing diploid genotypes (0,1,2) for 118 ancient Eurasians. The 10,000 filtered SNPs were randomly selected from a large set of variants. The matrix contains no missing genotypes.
- meta
metadata on individuals:
Instance.ID,Group.ID,Countryof origin andcoverage
Source
https://reich.hms.harvard.edu/datasets
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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