basecontent: Sequence Base Contents

Description Usage Arguments Value Examples

Description

Function to compute the amounts of each nucleotide in a sequence.

Usage

1

Arguments

seq

character vector of length n containg a valid sequence (A/T/C/G)

Value

matrix with n rows and 4 columns with the counts for each base.

Examples

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2
sequences <- c("ATATATCCCCG", "TTTCCGAGC")
basecontent(sequences)

benilton/oligoOld documentation built on May 12, 2019, 11:52 a.m.