iqtl_view: Import and view an IQTL file

In benjbuch/summerrband: Analyse Gel-shift Assays

Description

Reads a file exported with ImageQuant TL and performs basic actions to tidy up the format using iqtl_read and draws an overview plot.

Usage

iqtl_view(file, selected_bands = character(), ..., on_y_axis = "vol_frac")

Arguments

file	Path to the file.
selected_bands	Character vector to imit plotting to specific bands, e.g. "band_0".
...	Other arguments passed to iqtl_read.
on_y_axis	Which variable to draw on the y axis.

Details

This function calls iqtl_read with its default arguments for row_name ("band"), col_group ("lane"), .id ("id") and .sep ("_"). It returns the same object as a default call to iqtl_read. As a side-effect, a plot is printed to the current device.

Value

A data frame of class data.table.

benjbuch/summerrband documentation built on Dec. 19, 2021, 8:43 a.m.